Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20incognita_20[genbank_20GCA_5F900182535.1_202017-05-05] 12,091 sequences; 183,531,997 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq668 116 3e-21 seq47 111 1e-19 >seq668 Length=57742 Score = 116 bits (128), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493 ||||| |||||||| |||| ||||| | |||| | ||| ||||||||||||| | Sbjct 38503 AAAGCTGATTGGGCTCTTCG-TTGGACTGCTAGTAAAGAAGCTTCATTTGGTGAACGTCT 38561 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| |||| ||| |||| ||||| ||||| ||||| Sbjct 38562 TATTGCTTTTGCCGCAGTTGAGGGTATATTCTTCTCTGGAAGTTTTGCTGCAATTTTTTG 38621 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | |||||||| || ||||||| || ||||| || ||||| || || || || || Sbjct 38622 GCTAAAGAAACGCGGTTTTATGCCTGGACTGACACAAAGTAATGAATTAATTTCTCGTGA 38681 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC 61654 || || | ||| | ||||||||| ||| || ||| ||| Sbjct 38682 TGAAGGACTTCATCGAGATTTTGCTTGTTTACTTTTCCAAC 38722 >seq47 Length=171977 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493 ||||| |||||||| |||| ||||| | |||| | ||| ||||||||||||| | Sbjct 33941 AAAGCTGATTGGGCTCTTCG-TTGGACTGCTAGTAAAGAAGCTTCATTTGGTGAACGTCT 33883 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | ||| |||||| |||| ||| |||| ||||| ||||| ||||| Sbjct 33882 CATTGCTTTTGCCGCGGTTGAGGGTATATTCTTCTCTGGAAGTTTTGCTGCAATTTTTTG 33823 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | |||||||| || |||||| || ||||| || ||||| || || || || || Sbjct 33822 GCTAAAGAAACGCGGTTATATGCCTGGACTGACACAAAGTAATGAATTAATTTCTCGAGA 33763 Query 61614 CGAGGGCATGCATTGTGATTTTGCT 61638 || || | ||| | ||||||||| Sbjct 33762 TGAAGGACTTCATCGAGATTTTGCT 33738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397509414752240