Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq30980 80.6 7e-13 seq29613 80.6 7e-13 seq29328 80.6 7e-13 seq26423 80.6 7e-13 seq25661 80.6 7e-13 seq25380 80.6 7e-13 seq25328 80.6 7e-13 seq16417 80.6 7e-13 seq8476 80.6 7e-13 seq704 80.6 7e-13 seq30745 75.2 3e-11 seq23487 75.2 3e-11 >seq30980 Length=2044 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1761 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1702 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1701 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1662 >seq29613 Length=2215 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1389 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1330 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1329 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1290 >seq29328 Length=2252 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1771 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1712 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1711 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1672 >seq26423 Length=2676 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 214 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 273 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 274 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 313 >seq25661 Length=2799 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 174 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 115 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 114 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 75 >seq25380 Length=2847 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 2605 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 2546 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 2545 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 2506 >seq25328 Length=2854 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1476 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1417 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1416 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1377 >seq16417 Length=4974 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 902 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 961 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 962 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1001 >seq8476 Length=8905 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 5544 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 5603 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 5604 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 5643 >seq704 Length=26639 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 25843 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 25784 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 25783 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 25744 >seq30745 Length=2073 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| || |||| ||||||||| || Sbjct 632 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGCCATTTGGCTACCTTAAGAG 573 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 572 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 533 >seq23487 Length=3192 Score = 75.2 bits (82), Expect = 3e-11 Identities = 68/86 (79%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 3102 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 3161 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 || || ||||| |||||||||||| Sbjct 3162 AGTCATAGTTACTCCCGCCGTTTACC 3187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260404852672