Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20javanica_20[genbank_20GCA_5F900003945.1_202017-04-29] 31,341 sequences; 235,798,407 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq30980 78.8 3e-12 seq29613 78.8 3e-12 seq29328 78.8 3e-12 seq26423 78.8 3e-12 seq25661 78.8 3e-12 seq25380 78.8 3e-12 seq25328 78.8 3e-12 seq16417 78.8 3e-12 seq8476 78.8 3e-12 seq704 78.8 3e-12 seq23487 77.0 1e-11 >seq30980 Length=2044 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1761 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1702 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 1701 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 1669 >seq29613 Length=2215 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1389 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1330 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 1329 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 1297 >seq29328 Length=2252 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1771 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1712 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 1711 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 1679 >seq26423 Length=2676 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 214 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 273 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 274 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 306 >seq25661 Length=2799 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 174 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 115 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 114 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 82 >seq25380 Length=2847 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 2605 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 2546 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 2545 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 2513 >seq25328 Length=2854 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1476 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1417 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 1416 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 1384 >seq16417 Length=4974 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 902 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 961 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 962 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 994 >seq8476 Length=8905 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 5544 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 5603 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 5604 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 5636 >seq704 Length=26639 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 25843 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 25784 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 25783 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 25751 >seq23487 Length=3192 Score = 77.0 bits (84), Expect = 1e-11 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 3102 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 3161 Query 446 GGTTATAGTTACCACCGCCGTTTAC 470 || |||||||| ||||||||||| Sbjct 3162 AGTCATAGTTACTCCCGCCGTTTAC 3186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701866450816