Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11454 86.0 1e-14 seq4202 78.8 2e-12 >seq11454 Length=465128 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||| ||||| | | ||| |||||||||| |||||||| | ||||||||| | |||| Sbjct 72700 ATTGTAATTAATTCCCTTGAACGAGGAATTGCTAGTAAGTATGAGTCATCAGCTCACGTT 72759 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||| |||||| Sbjct 72760 GATTACGTCCCTGCCATTTGTA 72781 >seq4202 Length=1523 Score = 78.8 bits (86), Expect = 2e-12 Identities = 78/100 (78%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTA--TCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| | | | ||| |||||| || ||| |||| ||||| ||| Sbjct 1332 TTCTTAGAGGGACTACATGTGTTTTAGCATGTGGAAGCTTAGGGCGATAAAAGGTCCGTG 1391 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| |||||||||||||||| ||||| | |||||||| Sbjct 1392 ATGCTCTTAGATGTTCTGGGCTATACGCGTGATACACTGA 1431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947087624192