Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10797 98.7 8e-16 seq2880 89.7 4e-13 >seq10797 Length=109758 Score = 98.7 bits (108), Expect = 8e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 ||||||| || || || ||||||||||| | ||| || ||||| | ||| || ||| Sbjct 7037 ACTCAAAAATATCCGCGTGCCATGGTTCTAAGTAAATAGCGAATGCGCCGGGTCGCTTGT 7096 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 |||||||||||| |||||||||||| |||||| | ||||||||||| |||| | | Sbjct 7097 TGCCACCTTGGTCCACGTAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGTATTAAGC 7156 Query 66546 CGTTAGA 66552 |||| || Sbjct 7157 CGTTTGA 7163 >seq2880 Length=552878 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61724 AGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGT 61783 |||||||| |||| || ||||||| || | || || ||||||||| | ||||||| Sbjct 479645 AGGAATTTTTGACCGAGTCTTTGCCAGTGGACATGATTGGAATGAATTGTCGTCTAATGT 479586 Query 61784 CGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGT 61830 |||||||||||||||| || ||||| | | || ||||||| || ||| Sbjct 479585 CGCAGTATATTGAATTCGTCGCCGATCATTTGCTGGTCGAGTTAGGT 479539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397510514648960