Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014
-09-26] 29,375 sequences; 294,400,206 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq30 82.4 1e-13
seq1515 73.4 6e-11
>seq30
Length=227172
Score = 82.4 bits (90), Expect = 1e-13
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225
||||||| ||||| |||||||||||| |||| | ||||| |||| ||||||| ||||
Sbjct 190974 TCGTTATTGGAATAAACCAGACAAATTGCTCCTCTAACTACGAACCATCATGCACTACCA 190915
Query 226 CCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||| ||| || ||||||| ||||||||||
Sbjct 190914 ACCACCATATCGAGGAAGAGCTTTCAATCTGTC 190882
>seq1515
Length=42711
Score = 73.4 bits (80), Expect = 6e-11
Identities = 54/63 (86%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
||| ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||| |||
Sbjct 1986 CCATCAACTAAGAGCGACCATGCACCACCAACCACCGAATCGAGAAAGAGCTTTCAGTCT 2045
Query 256 GTC 258
|||
Sbjct 2046 GTC 2048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796573254375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |