Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nippostrongylus_20brasiliensis_20[genbank_20GCA_5F000951335.1_202014 -09-26] 29,375 sequences; 294,400,206 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq824 114 2e-23 >seq824 Length=65945 Score = 114 bits (126), Expect = 2e-23 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 |||| |||| | ||||| | | ||||||| |||| ||||||| | |||| |||| Sbjct 882 GCCGAAAGGCATTGGTAAACCGTTGAAACTCTTCCGTGACCGGGATAGGGAATTGTAATT 823 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| | ||| |||||||||| ||||||||| | | ||||||||| | || |||||||||| Sbjct 822 ATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGCTGATTACGTC 763 Query 316 CCTGCCCTTTGTA 328 |||||| |||||| Sbjct 762 CCTGCCATTTGTA 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946921760000