Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq721 159 5e-37 >seq721 Length=74390 Score = 159 bits (176), Expect = 5e-37 Identities = 174/225 (77%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 |||||| |||||||||||| ||| || ||||| |||||||| | ||||||||||||| || Sbjct 11745 TACAAATGGCAGGGACGTAATCAGCGTGAGCT-GATGACTCACACTTACTAGGAATT-CC 11688 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT-A 120 ||||||||| || |||| |||| ||||||| ||||| | | |||||| | || | Sbjct 11687 TCGTTGAAGGGAAATAATTACAATTCCCTATCCCGGTCACGGAGGAGTTTCAACGGTTTA 11628 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||| ||||| | || ||| || | ||| | || |||||||| ||||| | Sbjct 11627 CCAGTACCTTTCGGCAATGG--ATATGCTAGCTGATTCTTCCATTGTAGCGCACGTGCAG 11570 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| |||||||||||||||||||| ||||||| | ||||| || Sbjct 11569 CCCCAGACATCTAAGGGCATCACAGATCTGTTATCG-CTCAATCT 11526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751531902325