Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oesophagostomum_20dentatum_20[genbank_20GCA_5F000797555.1_202014-12- 15] 64,255 sequences; 443,017,110 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21197 87.8 3e-15 seq721 78.8 2e-12 >seq21197 Length=2429 Score = 87.8 bits (96), Expect = 3e-15 Identities = 79/97 (81%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||| ||||||||||| ||| | ||||| ||||| |||| | | |||||| Sbjct 2409 TTTACTTTGAATAAATTAGAGTGCTCAGAACAGGCGTTTGCCTGAATGCTCGATCATGGA 2350 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 170 |||||| || ||||| | |||||||| ||| |||||| Sbjct 2349 ATAATAAAAGAGGAC-TTCGGTTCTA-TTTATTGGTT 2315 >seq721 Length=74390 Score = 78.8 bits (86), Expect = 2e-12 Identities = 170/249 (68%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 |||||| |||| ||||||||||| ||| | |||| ||||| |||| | | |||||| Sbjct 16799 TTTACTCTGAATAAATTAGAGTGCTCAGAAAAGGCGTTTGCCTGAATGCTCGATCATGGA 16858 Query 134 ATAATA---GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||| || || || | ||||| |||| | | ||| | || | ||||| | Sbjct 16859 ATAATAATGAAAGAGCACCT-CGGTTTCATTT--ATCGGTTCAGGAACTGAAATAATGGT 16915 Query 191 TAATAGGGATAGTCG-GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 ||| ||||| | | | |||| |||| | | ||||||||||||| || | Sbjct 16916 TAAGAGGGACAATTGAGGGGCACTCGTATCCCTGCGCGAGAGGTGAAATTCGTGAACCGC 16975 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | || ||| |||||||| || ||||| |||| ||||||||||| ||||||| Sbjct 16976 AGGGGAACACCCTAAAGCGAAAGCATTTGCCAAGAATGTATTCATTAATCA-AGAACGAA 17034 Query 310 AGTTAGGGG 318 ||| || || Sbjct 17035 AGTCAGAGG 17043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914611938240