Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3797 98.7 4e-18 >seq3797 Length=4446 Score = 98.7 bits (108), Expect = 4e-18 Identities = 82/98 (84%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||| |||||| | ||||||||||||||||||||||||| |||| ||||||||| ||| Sbjct 1908 TCCCTCCCAGGGAT-CTTTTCACCTTTCCCTCACGGTACT-GTCCACTATCGGTCGTCAA 1965 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 ||||||||||| |||| | ||||| | ||| ||||| Sbjct 1966 GGAGTATTTAGACTTACAAGATGGTCTCTCCACATTCA 2003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816773500928