Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3797 105 2e-20 >seq3797 Length=4446 Score = 105 bits (116), Expect = 2e-20 Identities = 105/131 (80%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 290 ACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAG 349 ||| ||||| || ||| ||||||| |||||||||||||||||| || ||||||||||| | Sbjct 1905 ACTTCCCTC-CCAGGGATCTTTTCACCTTTCCCTCACGGTACT-GTCCACTATCGGTC-G 1961 Query 350 TC-AGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCT 408 || || ||||||||| ||| | ||||||| | ||| ||||| || |||| | ||| Sbjct 1962 TCAAGGAGTATTTAGACTTACAAGATGGTCTCTCCACATTCAAGCAGAGTTCCACGTATC 2021 Query 409 CCGTCCTACTC 419 |||| |||||| Sbjct 2022 CCGTTCTACTC 2032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241035419648