Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20flexuosa_20[genbank_20GCA_5F000951355.1_202014-09-26] 45,472 sequences; 86,175,476 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq6883 87.8 3e-15 >seq6883 Length=2868 Score = 87.8 bits (96), Expect = 3e-15 Identities = 93/121 (77%), Gaps = 5/121 (4%) Strand=Plus/Plus Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147 |||||||||| | | |||| || ||||||||||||| | || || |||||||||| || Sbjct 950 CACCAGAGGTATATTCATCTCGATCCTCTCGTACTAGAGTTAGATCTTCTCAAATTT-CT 1008 Query 148 ACGCCCACGACGGATAGGGACCGAACT----GTCTCGCGACGTTCTGAACCCAGCTCGCG 203 | | |||| | || || |||||||| ||||| ||||||||| |||||| ||| || Sbjct 1009 TCACTCACGGCAGAGAGAAACCGAACTGTCGGTCTCACGACGTTCTAAACCCAACTCACG 1068 Query 204 T 204 | Sbjct 1069 T 1069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780456049792