Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20ochengi_20[genbank_20GCA_5F000950515.2_202016-03-04] 20,243 sequences; 91,660,559 total letters Query= NC_010356.1 Length=190032 Score E Sequences producing significant alignments: (Bits) Value seq1189 100 3e-16 >seq1189 Length=17567 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 114796 TTATGAAGGCGCACGTGTTATCGAACCGAAGAAGGGTTTTTATAATACAGCTATAGCAAC 114855 ||||||||| ||| || ||||| || | ||||| |||||||| | || ||||| Sbjct 10807 TTATGAAGGTGCAACAGTAATCGATCCTATTCGAGGTTTCTATAATACTCCAATTGCAAC 10748 Query 114856 TCTTGATTTTGCATCCCTCTACCCATCAATTATGATTGGGTATAATATGTGTTATACTAC 114915 |||||||||||||| || || ||||| |||||||||| ||||| | || |||||||| Sbjct 10747 GCTTGATTTTGCATCTCTATATCCATCCATTATGATTGCTCATAATTTATGCTATACTAC 10688 Query 114916 TTTGATACAGGGT 114928 ||||| | |||| Sbjct 10687 ATTGATTCGGGGT 10675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607820559677760