Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3 107 3e-21 >seq3 Length=25485961 Score = 107 bits (118), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 9/152 (6%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 || ||||||||| |||| |||||| | | |||||| | ||||| |||| || Sbjct 22355019 AATAATTGCAAT------TCCCGATCACGGAGGATTTTCAAGGGGTTACCAATACCTTTC 22354966 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || | ||| | || | || ||| | | ||||||||||||||||| |||| | |||||| Sbjct 22354965 GGTAATGGTTACAG-CACGCTGATTCCTCCAGTGTAGCGCGCGTGCAGCCCTGGACATCT 22354907 Query 193 AAGGGCATCACAGACCTGTTATTGCCT-CAAA 223 ||||||||||||||||||||||||||| |||| Sbjct 22354906 AAGGGCATCACAGACCTGTTATTGCCTACAAA 22354875 Score = 89.7 bits (98), Expect = 8e-16 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 ||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 10421669 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC- 10421726 Query 222 AACTTC 227 |||||| Sbjct 10421727 AACTTC 10421732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751995089910