Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq5 80.6 7e-13 >seq5 Length=16048563 Score = 80.6 bits (88), Expect = 7e-13 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 3 CGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGC 62 ||||||| | |||| | ||| || |||||||||||||| | | | |||| | | Sbjct 13396438 CGGATACCCCGCATTTGCACGCGGAATTCAATTTCACTGAATTGATGTTCGAGATGGTGG 13396379 Query 63 CGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTT 122 || |||||||||| |||| ||||| ||||| ||| || ||||||||||||||| Sbjct 13396378 AAAAATTATTACGCCATTTGTGCGAATCGGATCTTACTCGATAACGAATTTCGCTACCTT 13396319 Query 123 AGGACCGTTATTGTTACGGCCGCCGTTTA 151 || || || | ||||| | ||||||| Sbjct 13396318 AGAACAGTCAATGTTATGTTAACCGTTTA 13396290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260791502208