Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-14 >seq5 Length=16048563 Score = 86.0 bits (94), Expect = 1e-14 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||| | ||| ||| | ||||||||| || | || | |||| ||| || Sbjct 13396434 TACCCCGCATTTGCACGCGGAATTCAATTTCACTGAATTGATGTTCGAGATGGTGGAAAA 13396375 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || ||||||| || ||||| ||||| ||||| ||| || ||||||||||||||||| | Sbjct 13396374 ATTATTACGCCATTTGTGCGAATCGGATCTTACTCGATAACGAATTTCGCTACCTTAGAA 13396315 Query 121 CCGTTATAGTTACGGCCGCCGTTTA 145 | || | |||| | ||||||| Sbjct 13396314 CAGTCAATGTTATGTTAACCGTTTA 13396290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062392839424