Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 5e-17 seq1 87.8 2e-15 >seq2 Length=28345163 Score = 93.3 bits (102), Expect = 5e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||| |||||||||||| |||||||||| Sbjct 24208883 AAACCAACAAAATAGAACCG-AGATCCTATTTCATTATTCCATGCACGAGTATTCGGGCA 24208941 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||| || |||| |||||||||||| |||||||||| Sbjct 24208942 TTAGCCCGCATTGAGCACTCTAATTTTTTCAAGGTAAA 24208979 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||| |||||||||||| |||||| ||| Sbjct 267964 AAACCAACAAAATAGAACCG-AGATCCTATTTCATTATTCCATGCACGAGTATTCAGGCA 268022 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||| || |||| |||||||||||| |||||||||| Sbjct 268023 TTAGCCCGCATTGAGCACTCTAATTTTTTCAAGGTAAA 268060 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||| |||||||||||| |||||| ||| Sbjct 15515942 AAACCAACAAAATAGAACCG-AGATCCTATTTCATTATTCCATGCACGAGTATTCAGGCA 15516000 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||| || |||| |||||||||||| |||||||||| Sbjct 15516001 TTAGCCCGCATTGAGCACTCTAATTTTTTCAAGGTAAA 15516038 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||| |||||||||||| |||||| ||| Sbjct 26534005 AAACCAACAAAATAGAACCG-AGATCCTATTTCATTATTCCATGCACGAGTATTCAGGCA 26534063 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||| || |||| |||||||||||| |||||||||| Sbjct 26534064 TTAGCCCGCATTGAGCACTCTAATTTTTTCAAGGTAAA 26534101 >seq1 Length=2816604 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||| |||||||||||| |||||| ||| Sbjct 1590724 AAACCAACAAAATAGAACCG-AGATCCTATTTCATTATTCCATGCACGAGTATTCAGGCA 1590782 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||| || |||| |||||||||||| |||||||||| Sbjct 1590783 TTAGCCCGCATTGAGCACTCTAATTTTTTCAAGGTAAA 1590820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196113716