Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onchocerca_20volvulus_20[genbank_20GCA_5F000499405.2_202014-02-28] 674 sequences; 96,340,582 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq4 158 4e-36 >seq4 Length=16644688 Score = 158 bits (174), Expect = 4e-36 Identities = 145/181 (80%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 307 AAGCCTGATGCAGCAACGCCGCGTGAGCGATG-AAGGCCTTCGGGTCGTAAAGCTCTGTC 365 |||| |||| ||| | ||||||||| || | |||||||| |||| |||||||||| || Sbjct 11816536 AAGCTTGATCGAGCCATGCCGCGTGAATGAAGCAAGGCCTTTGGGTTGTAAAGCTCTTTC 11816595 Query 366 CTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGC 425 |||||||||||||||||||| | || |||| || |||||| | ||||| |||||| Sbjct 11816596 AGTGAGGAAGATAATGACGGTACTCGCAGAAGAAGTCCTGGCTAATTCCGTGCGAGCAGC 11816655 Query 426 CGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485 ||||||||||| || ||||||||||||| || ||||| | | |||||||| | ||||| Sbjct 11816656 TGCGGTAATACGGAGAGGGCTAGCGTTATTCGCAATTA-TTGCGCGTAAAGAGCACGTAG 11816714 Query 486 G 486 | Sbjct 11816715 G 11816715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497589906176