Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 205 2e-50
seq324 150 3e-34
seq323 123 5e-26
>seq1550
Length=4416
Score = 205 bits (226), Expect = 2e-50
Identities = 244/326 (75%), Gaps = 9/326 (3%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGA-TTC 69
||||| |||||||||| |||||| ||| || ||||||| || ||||| || | |||
Sbjct 3058 AGGGGAGTGAAATAGATCCTGAAACCGTATGCGTACAAGCAGTGGGAGCAGACTTTGTTC 3117
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
||||| |||| ||||||| |||||| | | ||| ||| | ||| || || ||||
Sbjct 3118 TGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATTT-TCAGTGGCAAGCTTAAC 3176
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | || || || || ||||||||| ||||| |||||| | ||| | |||
Sbjct 3177 CGAATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGGA 3231
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA-T 248
||||| ||||||| | |||||| ||| | ||||||||||| |||||| | ||| |
Sbjct 3232 ATAGACCCGAAACCGGGCGATCTATCCATGGGCAGGTTGAAGGTTAGGTAACAC-TGACT 3290
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
|||||||||||||| | |||||||||||| ||||||||| | || | ||||||||||
Sbjct 3291 GGAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACTTGTGGCTGGGGGTGAAAG 3350
Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||| |||| |||||| ||
Sbjct 3351 GCCAATCAAACCGGGAGATAGCTGGT 3376
>seq324
Length=1027
Score = 150 bits (166), Expect = 3e-34
Identities = 229/324 (71%), Gaps = 9/324 (3%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| || |||||| | |
Sbjct 907 AGGGGAGTGAAATAGATCCTGAAACCGCATGCTTACAAAAAGTAGGAGCCC---GCAAGG 851
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| ||| || |||||||
Sbjct 850 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 792
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| | || |||||| | ||| | |||
Sbjct 791 GAATAGGGG-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGTCCAGTCGCTGGGTG 737
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||| ||| | |||| ||||| || ||||| || |||
Sbjct 736 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGG 677
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| |||||||| | |||| ||| | ||||||| | || ||||||||||||||
Sbjct 676 AGGTCCGAACCGACTAGTGTTGCAAAACTAGCGGATGAGCTGTGGATAGGGGTGAAAGGC 617
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|| |||||| |||||||||| ||
Sbjct 616 TAAACAAACTTGGAAATAGCTGGT 593
>seq323
Length=4734
Score = 123 bits (136), Expect = 5e-26
Identities = 121/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238
||| | ||| |||||| |||| | |||||||||||| | |||| ||||| | |||
Sbjct 4734 AGTCGCTGGGTCTAGACCCGAAGCGGAGTGATCTACCCATGGCCAGGGTGAAGCAGAGGT 4675
Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298
|| | | ||||||||||||||| || |||||||| || ||||||||| | || |
Sbjct 4674 AAGACTTTGTGGAGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTG 4615
Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||||||||||||| |||| |||||| ||
Sbjct 4614 GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGT 4579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972689324544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |