Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq139 152 2e-34 >seq139 Length=7828 Score = 152 bits (168), Expect = 2e-34 Identities = 212/299 (71%), Gaps = 20/299 (7%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||| |||||| |||| | || |||||| ||||| || Sbjct 4761 CGACCCGTCTTGAAACACGGACCGAGGAGTGTAACTTGTACGCGAGTCAGAGGGTGGAAA 4820 Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGGT--------------GGGAACCCGT----- 505 |||| ||| ||||||||| || | ||| |||| || | Sbjct 4821 ACCCTACGGCGCAATGAAAGTAAAGGTCGGTTAACCGGCTGACATGGGATCCTTTCTTCG 4880 Query 506 GAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 ||| || ||||||| | || || ||| ||| | | ||| ||||| || Sbjct 4881 GAGAGGCGCACCATGGCCCTGTCTTGAGAGCTTGCTCTTGGGCAGAGGTAGAGCGTACAG 4940 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||| | ||| ||| |||||||||||||||||||| Sbjct 4941 GTTGCGACCCGAAAGATGGTGAACTATACTTGAGCAGGACGAAGCCAGAGGAAACTCTGG 5000 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | || | |||||||| ||||||||||||||| | | ||| |||||||||||| Sbjct 5001 TGGAAGTCCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGTATAGGGGCGA 5059 Score = 93.3 bits (102), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG-GGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| |||| ||| | |||||| ||||| || | |||| ||| || || |||||| Sbjct 4384 GAGTCGGGTTGCTTGAAAGTGCAGC-CTAAAGCTGGTGATAAACTTCATCAAAGGCTAAA 4442 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 ||||| || ||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 4443 TATTGATGCGAATTCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 4502 Query 159 AAGAGAGTTAAAAAGCACGTGAAAT 183 |||||||| || || ||||||||| Sbjct 4503 GAGAGAGTTCAAGAGAACGTGAAAT 4527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079755963350