Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq139 152 2e-34
>seq139
Length=7828
Score = 152 bits (168), Expect = 2e-34
Identities = 212/299 (71%), Gaps = 20/299 (7%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| |||||||||| |||||| |||| | || |||||| ||||| ||
Sbjct 4761 CGACCCGTCTTGAAACACGGACCGAGGAGTGTAACTTGTACGCGAGTCAGAGGGTGGAAA 4820
Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGGT--------------GGGAACCCGT----- 505
|||| ||| ||||||||| || | ||| |||| || |
Sbjct 4821 ACCCTACGGCGCAATGAAAGTAAAGGTCGGTTAACCGGCTGACATGGGATCCTTTCTTCG 4880
Query 506 GAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564
||| || ||||||| | || || ||| ||| | | ||| ||||| ||
Sbjct 4881 GAGAGGCGCACCATGGCCCTGTCTTGAGAGCTTGCTCTTGGGCAGAGGTAGAGCGTACAG 4940
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
|||| |||||||||||||||||||||| | ||| ||| ||||||||||||||||||||
Sbjct 4941 GTTGCGACCCGAAAGATGGTGAACTATACTTGAGCAGGACGAAGCCAGAGGAAACTCTGG 5000
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| | || | |||||||| ||||||||||||||| | | ||| ||||||||||||
Sbjct 5001 TGGAAGTCCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGTATAGGGGCGA 5059
Score = 93.3 bits (102), Expect = 2e-16
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG-GGAGGTAAATTTCTTCTAAAGCTAAA 98
|||||| |||| ||| | |||||| ||||| || | |||| ||| || || ||||||
Sbjct 4384 GAGTCGGGTTGCTTGAAAGTGCAGC-CTAAAGCTGGTGATAAACTTCATCAAAGGCTAAA 4442
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
||||| || ||||||| ||||||| |||| ||||| || |||| |||||| |
Sbjct 4443 TATTGATGCGAATTCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 4502
Query 159 AAGAGAGTTAAAAAGCACGTGAAAT 183
|||||||| || || |||||||||
Sbjct 4503 GAGAGAGTTCAAGAGAACGTGAAAT 4527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079755963350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |