Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq323 306 5e-81 seq1550 196 7e-48 >seq323 Length=4734 Score = 306 bits (338), Expect = 5e-81 Identities = 222/255 (87%), Gaps = 9/255 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||||| Sbjct 3403 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTAC-GACTTCGCAC 3461 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct 3462 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACAACCAGCTCA 3521 Query 121 ACACGTC-------GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTT 173 ||| | | |||||||| |||| ||||||||||||||||||||||| | || Sbjct 3522 -CACCGCAAAGAGTGATCACCAGCCATGGCCCCCCTTCTCCCGAAGTTACGGGGGTAATT 3580 Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233 |||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||| Sbjct 3581 TGCCGAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACCACCTG 3640 Query 234 TGTCGGTTTACGGTA 248 ||||||||| |||| Sbjct 3641 TGTCGGTTTGGGGTA 3655 >seq1550 Length=4416 Score = 196 bits (216), Expect = 7e-48 Identities = 195/251 (78%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||||||| |||||||| || |||| | || || |||| Sbjct 4416 TTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC-GTGTTTGCACA 4358 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||| |||||||| || || || | ||| |||| | ||||| | Sbjct 4357 GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGGCTTCAGCTTAC 4298 Query 122 ----CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || ||| |||||| || ||| | ||||||||||||||||||| |||||||||| Sbjct 4297 GGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGCACCATTTTGCC 4238 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 | |||||| ||| ||||| | | | |||||| |||||||||||||||||||||||||| Sbjct 4237 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTGTC 4178 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 4177 GGTTTGGGGTA 4167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694323466921