Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq323 306 5e-81
seq1550 196 7e-48
>seq323
Length=4734
Score = 306 bits (338), Expect = 5e-81
Identities = 222/255 (87%), Gaps = 9/255 (4%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct 3403 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTAC-GACTTCGCAC 3461
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
|||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||
Sbjct 3462 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACAACCAGCTCA 3521
Query 121 ACACGTC-------GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTT 173
||| | | |||||||| |||| ||||||||||||||||||||||| | ||
Sbjct 3522 -CACCGCAAAGAGTGATCACCAGCCATGGCCCCCCTTCTCCCGAAGTTACGGGGGTAATT 3580
Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233
|||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct 3581 TGCCGAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACCACCTG 3640
Query 234 TGTCGGTTTACGGTA 248
||||||||| ||||
Sbjct 3641 TGTCGGTTTGGGGTA 3655
>seq1550
Length=4416
Score = 196 bits (216), Expect = 7e-48
Identities = 195/251 (78%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| |||||||||||||||| |||||||| || |||| | || || ||||
Sbjct 4416 TTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC-GTGTTTGCACA 4358
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| |||||||| || || || | ||| |||| | ||||| |
Sbjct 4357 GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGGCTTCAGCTTAC 4298
Query 122 ----CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| ||| |||||| || ||| | ||||||||||||||||||| ||||||||||
Sbjct 4297 GGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGCACCATTTTGCC 4238
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
| |||||| ||| ||||| | | | |||||| ||||||||||||||||||||||||||
Sbjct 4237 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTGTC 4178
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 4177 GGTTTGGGGTA 4167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694323466921
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |