Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1550 190 2e-46 seq323 87.8 2e-15 >seq1550 Length=4416 Score = 190 bits (210), Expect = 2e-46 Identities = 122/133 (92%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 20 GAGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 79 || |||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||| Sbjct 4284 GAAGGACTTGCTCCGTAAGCTGAAGCCAGTCGAAGATACCAGCTGGCTGCAACTGTTTAT 4343 Query 80 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGT 139 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4344 TAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGT 4403 Query 140 GCCGGAAGGTTAA 152 || |||||||||| Sbjct 4404 GCTGGAAGGTTAA 4416 >seq323 Length=4734 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| ||||| | ||||||||||| ||||||||||| | ||| || || Sbjct 3509 GGTCGCAGAGACCAGAGAGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCGT 3450 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 3449 AAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 3404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476747449637