Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq323 349 9e-94 seq1550 347 3e-93 >seq323 Length=4734 Score = 349 bits (386), Expect = 9e-94 Identities = 332/422 (79%), Gaps = 8/422 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | |||||||||||||||||||||||||||||| ||||||||| Sbjct 3216 GCATCTTCACTCGTACTGCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCGTT 3275 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3276 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 3335 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCG--TTA----GCTAAC 186 | |||||||||||||||||| |||||||| || ||||||||| ||| ||||| Sbjct 3336 TAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCTCAGCTTCGCGGATTACTCCACTAAC 3395 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | |||||||||| ||||||||||||||||| || ||||| || ||| || | Sbjct 3396 CGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACT 3455 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||| | ||||||||||| ||||||||||| | ||||| ||| ||||| | Sbjct 3456 TCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACAACC 3515 Query 307 AGCTTACGGAGCAAGTCCT--TCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 |||| || |||| | ||||| | ||| | ||||||||||||||||||| | Sbjct 3516 AGCTCACACCGCAAAGAGTGATCACCAGCCATGGCCCCCCTTCTCCCGAAGTTACGGGGG 3575 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACC 424 |||||| |||||||| || |||| |||| | |||||| |||||||||||| ||| Sbjct 3576 TAATTTGCCGAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACC 3635 Query 425 AC 426 || Sbjct 3636 AC 3637 >seq1550 Length=4416 Score = 347 bits (384), Expect = 3e-93 Identities = 216/232 (93%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 4416 TTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTCGTGTTTGCACAG 4357 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314 |||||||||||||||||||||| ||||| |||||||||||||| ||| | |||||||| Sbjct 4356 TGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGGCTTCAGCTTACG 4297 Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4296 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGCACCATTTTGCCT 4237 Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 4236 AGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCAC 4185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260656558784