Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq323 349 9e-94
seq1550 347 3e-93
>seq323
Length=4734
Score = 349 bits (386), Expect = 9e-94
Identities = 332/422 (79%), Gaps = 8/422 (2%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| | | |||||||||||||||||||||||||||||| |||||||||
Sbjct 3216 GCATCTTCACTCGTACTGCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCGTT 3275
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3276 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 3335
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCG--TTA----GCTAAC 186
| |||||||||||||||||| |||||||| || ||||||||| ||| |||||
Sbjct 3336 TAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCTCAGCTTCGCGGATTACTCCACTAAC 3395
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246
| | |||||||||| ||||||||||||||||| || ||||| || ||| || |
Sbjct 3396 CGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACT 3455
Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306
| ||| | ||||||||||| ||||||||||| | ||||| ||| ||||| |
Sbjct 3456 TCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACAACC 3515
Query 307 AGCTTACGGAGCAAGTCCT--TCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364
|||| || |||| | ||||| | ||| | ||||||||||||||||||| |
Sbjct 3516 AGCTCACACCGCAAAGAGTGATCACCAGCCATGGCCCCCCTTCTCCCGAAGTTACGGGGG 3575
Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACC 424
|||||| |||||||| || |||| |||| | |||||| |||||||||||| |||
Sbjct 3576 TAATTTGCCGAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACC 3635
Query 425 AC 426
||
Sbjct 3636 AC 3637
>seq1550
Length=4416
Score = 347 bits (384), Expect = 3e-93
Identities = 216/232 (93%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 4416 TTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTCGTGTTTGCACAG 4357
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314
|||||||||||||||||||||| ||||| |||||||||||||| ||| | ||||||||
Sbjct 4356 TGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGGCTTCAGCTTACG 4297
Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 4296 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGCACCATTTTGCCT 4237
Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 4236 AGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCAC 4185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260656558784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |