Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq323 327 2e-87 seq1550 73.4 8e-11 >seq323 Length=4734 Score = 327 bits (362), Expect = 2e-87 Identities = 309/393 (79%), Gaps = 37/393 (9%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAATCG 64 |||||||||| | | | ||||||||| |||||| || ||||||| || ||| ||| Sbjct 3216 GCATCTTCACTCGTACTGCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCA--TCG 3273 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3274 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 3333 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC---GATTGCT---CTA 178 |||||||||||||||||||||||||||||| | ||| | ||||| |||| || ||| Sbjct 3334 TATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCTCAGCTTCGCGGATTACTCCACTA 3393 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || | ||| |||||||||||||||||||||||||||||| | ||||||||||||| ||| Sbjct 3394 ACCGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGA 3453 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---- 294 ||| ||| |||||||||||| |||||||||||||| || |||||||| || Sbjct 3454 CTTCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACAA 3513 Query 295 --------------------TG-TCA-TAGACA-GGCACCCCTTCTCCCTAAGTTACGGG 331 || ||| || || ||| ||||||||||| |||||||||| Sbjct 3514 CCAGCTCACACCGCAAAGAGTGATCACCAGCCATGGCCCCCCTTCTCCCGAAGTTACGGG 3573 Query 332 GTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 | | |||||||||||||||||| | |||| || Sbjct 3574 GGTAATTTGCCGAGTTCCTTAACCACAGTTATC 3606 >seq1550 Length=4416 Score = 73.4 bits (80), Expect = 8e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 |||||||||||||||||||||||||||| | ||||| || ||| || || ||| | Sbjct 4416 TTAACCTTCCAGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTCGTGTTTGCACAG 4357 Query 249 ACCTGTGTTTTTGGTAAACAGTCGC 273 |||||||||| |||||||| || Sbjct 4356 TGCTGTGTTTTTAATAAACAGTTGC 4332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062279130752