Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 535 1e-149
>seq1550
Length=4416
Score = 535 bits (592), Expect = 1e-149
Identities = 421/500 (84%), Gaps = 8/500 (2%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1404 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1463
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||||||||||||||||||| | ||||||||||| || | ||
Sbjct 1464 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGAGAACTTTC 1523
Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178
|||||| || ||| |||||||| || | |||||||| ||||||| |||||||
Sbjct 1524 CAGAGATGGATTGGTG---CCTTCGGGA-ACTCTGAGACAGGTGCTGCATGGCTGTCGTC 1579
Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238
||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1580 AGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTT 1639
Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296
|||| || ||| | |||| |||| ||| ||||||| |||| |||| ||||||||||||
Sbjct 1640 GCCAGCACGTTATGGTGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGG 1699
Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356
||| |||||||| |||||||| |||||| || | ||||||||||||||||||||||| |
Sbjct 1700 GGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGTCG 1759
Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416
||||||||| || || ||||||||| ||| ||||||||||| | || ||| |||
Sbjct 1760 GTACAAAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGG 1819
Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476
|| | |||||||||||||||| ||||| |||||||||||||||||| |||||| |||
Sbjct 1820 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATG 1879
Query 477 CTACGGTGAATACGTTCCCG 496
| ||||||||||||||||||
Sbjct 1880 CCACGGTGAATACGTTCCCG 1899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503828889920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |