Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1550 535 1e-149 >seq1550 Length=4416 Score = 535 bits (592), Expect = 1e-149 Identities = 421/500 (84%), Gaps = 8/500 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 1404 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1463 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||||||||||||| | ||||||||||| || | || Sbjct 1464 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGAGAACTTTC 1523 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || | |||||||| ||||||| ||||||| Sbjct 1524 CAGAGATGGATTGGTG---CCTTCGGGA-ACTCTGAGACAGGTGCTGCATGGCTGTCGTC 1579 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 1580 AGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTT 1639 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||| || ||| | |||| |||| ||| ||||||| |||| |||| |||||||||||| Sbjct 1640 GCCAGCACGTTATGGTGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGG 1699 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| || | ||||||||||||||||||||||| | Sbjct 1700 GGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGTCG 1759 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 ||||||||| || || ||||||||| ||| ||||||||||| | || ||| ||| Sbjct 1760 GTACAAAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGG 1819 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 || | |||||||||||||||| ||||| |||||||||||||||||| |||||| ||| Sbjct 1820 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATG 1879 Query 477 CTACGGTGAATACGTTCCCG 496 | |||||||||||||||||| Sbjct 1880 CCACGGTGAATACGTTCCCG 1899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503828889920