Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq139 217 2e-54 >seq139 Length=7828 Score = 217 bits (240), Expect = 2e-54 Identities = 199/244 (82%), Gaps = 7/244 (3%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | |||||||||||||||||||||||||||| || ||| Sbjct 3020 CAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATCGC-TCA 2962 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGCCACCAACC-ATAGTC 134 | || | || | | || | ||||||||||||| || ||| | || | | || Sbjct 2961 ATCT-CGTGCGGTTAAACACCGCTTATCCCTCTAAGAAGTTCA--CACGACCCGAAAATC 2905 Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 | || |||||||| |||||| |||||| ||||||||||||| ||||||||||||| | Sbjct 2904 G-TGAAACTATTTAGTAGGTTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCGC 2846 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||||||||||||||||||||||| ||| |||| |||||||||| |||||| Sbjct 2845 TCCACCAACTAAGAACGGCCATGCACCACCAACCACCAAATCGAGAAAGAGCTTTCAATC 2786 Query 255 TGTC 258 |||| Sbjct 2785 TGTC 2782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796712180937