Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq139 361 9e-98
seq323 87.8 3e-15
>seq139
Length=7828
Score = 361 bits (400), Expect = 9e-98
Identities = 236/260 (91%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 7191 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 7132
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 7131 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 7072
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7071 GAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 7012
Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274
||||||||||||| ||||||| | | ||| || | | ||||||||||||||||||
Sbjct 7011 GGTAACTTTTCTGACACCTCTTACGTGAAACTTTCACGATTAAAAGGATCGATAGGCCAC 6952
Query 275 ACTTTCATGGTTTGTATTCA 294
||||| ||| |||| |||
Sbjct 6951 GCTTTCGCGGTCTGTACTCA 6932
>seq323
Length=4734
Score = 87.8 bits (96), Expect = 3e-15
Identities = 125/175 (71%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| |||||||||||||| ||| || ||| || ||||| |||||
Sbjct 2649 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCCAACC 2708
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| | ||| || | | ||| || ||||||||||||| | |||| | |
Sbjct 2709 CTTGGGACCTACTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 2765
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||||| ||||| | | |||| |||||||| | ||| |||||
Sbjct 2766 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 2820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854302794912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |