Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1550 504 2e-140 >seq1550 Length=4416 Score = 504 bits (558), Expect = 2e-140 Identities = 315/336 (94%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct 947 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 890 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 830 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 829 TGTGGCTGGTCATCCTCTCAGACCAGCTACGGATCGTCGCCTTGGTGAGCCATTACCCCA 770 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||||||||||||||||||| |||||| ||| |||||| ||||| ||| Sbjct 769 CCAACTAGCTAATCCGACCTAGGCTCATCTAATAGCGTGAGGTCCGAAGATCCCCCACTT 710 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || Sbjct 709 TCTCCCGTAGGACGTATGCGGTATTAGCGCCCGTTTCCGGACGTTATCCCCCACTACTAG 650 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 |||||||||||||||||||||||||||||||||||| Sbjct 649 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071878038560