Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq323 358 2e-96
seq1550 349 1e-93
seq324 315 3e-83
>seq323
Length=4734
Score = 358 bits (396), Expect = 2e-96
Identities = 267/310 (86%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||||||| |||||| |||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct 4416 TCGACTACGAAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTCTCACTTACCGGCATTCG 4474
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119
|||||||| ||| || |||| ||||| || ||| | | ||||||||| |||||||||||
Sbjct 4475 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 4534
Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179
| |||||||||| |||||||||||||||||||||||||||||||||||||||| | |
Sbjct 4535 AGTAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCTCCCGG 4594
Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239
|||||||||||||||||||| | ||||| ||||||| || | |||||||| | ||| |||
Sbjct 4595 TTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTTTTCAACATTAGTCGGT 4654
Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299
|||||||||||| |||||||| |||||| |||| |||||| ||||||||| |||||
Sbjct 4655 TCGGTCCTCCACAAAGTCTTACCTCTGCTTCACCCTGGCCATGGGTAGATCACTCCGCTT 4714
Query 300 CGGGTCTTGA 309
||||||| ||
Sbjct 4715 CGGGTCTAGA 4724
>seq1550
Length=4416
Score = 349 bits (386), Expect = 1e-93
Identities = 415/551 (75%), Gaps = 19/551 (3%)
Strand=Plus/Minus
Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110
||| |||||||||||| | || |||||| | | | |||||||| | | ||||||
Sbjct 3489 CGGTATTCGGAGTTTGCATCGGTTTGGTAAGTCGGGATGACCCCCTAGCCGAAACAGTGC 3430
Query 111 TCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168
|||||| ||| || || |||| | |||| |||||||| ||||||||||||||||
Sbjct 3429 TCTACCCCCGAAGATGAGTTCACGAGGCGCT--ACCTAAATAGCTTTCGGGGAGAACCAG 3372
Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228
||||| | ||||||||||||||||||||| | ||||| ||||||| || | |||||||
Sbjct 3371 CTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAACTTTTCAA 3312
Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288
| ||| |||||||||||||| | || ||||| ||||||||||||||||||||||
Sbjct 3311 CGGTAGTCGGTTCGGTCCTCCAGTCAGTGTTACCTAACCTTCAACCTGCCCATGGATAGA 3252
Query 289 TCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCT 348
|| | | ||||||||| | || ||| | |||||||||| ||||||||||||||
Sbjct 3251 TCGCCCGGTTTCGGGTCTATTCCCAGCGACT-AGACGCCCTATTAAGACTCGCTTTCGCT 3193
Query 349 ACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCA 408
||| || ||| | | |||||| || || || || || |||| | | |||| | ||
Sbjct 3192 ACGCCTCCCCTATTC-GGTTAAGCTTGCCACTGAA-AATAAGTCGCTGACCCATTATACA 3135
Query 409 AAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA 468
||||| |||| ||||| | || |||| || ||||| || | ||||| ||| |
Sbjct 3134 AAAGGTACGCAGTCAC--AGAAC---AAAG-----TCTGCTCCCACTGCTTGTACGCATA 3085
Query 469 TGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTA 527
||||||||| |||||||||||||| | | ||||| |||||| ||||||||||||||||
Sbjct 3084 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 3025
Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587
|| || | |||||||||| || ||||||||| ||| || ||||||| ||| |||||
Sbjct 3024 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 2965
Query 588 CACGAAATTTC 598
|| | ||||
Sbjct 2964 GACAAGGTTTC 2954
>seq324
Length=1027
Score = 315 bits (348), Expect = 3e-83
Identities = 400/541 (74%), Gaps = 21/541 (4%)
Strand=Plus/Plus
Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110
||| |||||||||||| | || |||||| | | |||||||| | | ||||||
Sbjct 481 CGGTATTCGGAGTTTGCATAGGTTTGGTAAGTCGCCATGACCCCCTAGCCTAAACAGTGC 540
Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170
|||||| ||| | | || || || || |||||||| |||||| |||||||||||
Sbjct 541 TCTACCCCCGC-AGGTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAGCT 599
Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CAAC 229
|| | ||||||| || ||||||||||||||||||||| |||||| || |||||| ||||
Sbjct 600 ATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCAAC 658
Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289
||| ||||||| |||||| | |||| ||||| |||| ||||||||||||
Sbjct 659 ACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCATGGATAGAT 718
Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349
||||| | ||||||||| | | || ||| |||||||||||||||||| |||| |||
Sbjct 719 CACTTGGTTTCGGGTCTACACCCAGCGACT-GGACGCCCTATTCGGACTCGATTTCTCTA 777
Query 350 CGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409
||||| ||| | | ||||||||| || || || | || |||| | | |||| | |||
Sbjct 778 CGGCTCCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATTATACAA 835
Query 410 AAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACAT 469
|||| |||| ||||| ||| || ||||| || ||||| |||
Sbjct 836 AAGGTACGCAGTCAC------CCT----TGC----GGGCTCCTACTTTTTGTAAGCATGC 881
Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529
||||||||| |||||||||||||| || ||||| |||||| ||||||||||||||||||
Sbjct 882 GGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 941
Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589
|| | ||||||||| | |||||||||| ||| || ||||||| ||| ||||| |
Sbjct 942 GGTTCACTATCGGTCGATGATGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGA 1001
Query 590 C 590
|
Sbjct 1002 C 1002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817393211648
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