Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 625 7e-177
seq324 432 9e-119
seq323 77.0 8e-12
>seq1550
Length=4416
Score = 625 bits (692), Expect = 7e-177
Identities = 393/412 (95%), Gaps = 9/412 (2%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||| |||
Sbjct 3337 CCACAAGTCAT-CCGCTAACTTTT-CAACGGTAGTCGGTTCGGTCCTCCAGTCAGT-GTT 3281
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
||| |||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||
Sbjct 3280 ACCTAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATT-CCCAGC 3225
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 3224 GACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGCCTCCCCTATTCGGTTAAGCTT-G 3167
Query 189 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG 248
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3166 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACAGAACAAAGTCT 3107
Query 249 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3106 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 3047
Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3046 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 2987
Query 369 GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2986 GAGGATGGTCCCCCCATATTCAGACAAGGTTTCTCGTGCCCCGTCCTACTCG 2935
>seq324
Length=1027
Score = 432 bits (478), Expect = 9e-119
Identities = 353/415 (85%), Gaps = 14/415 (3%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| |||||| |||| |||| |||||||||||| ||||||||
Sbjct 627 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTACC 684
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| ||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| |
Sbjct 685 T-GTTACGGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 739
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||||||| ||||||||| | |||||| ||| | ||||| |||||||||||||||||
Sbjct 740 CCAGCGACTGGACGCCCTATTCGGACTCGATTT-CTCTACGGCTCCCCTATTCGGTTAAC 798
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 799 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTT--- 854
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
| ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 855 -GCGGGCTCCTACTTTTTGTAAGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 912
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||
Sbjct 913 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTAG 972
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct 973 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGGTTTCTCGTGCCCCGCCCTACT 1027
>seq323
Length=4734
Score = 77.0 bits (84), Expect = 8e-12
Identities = 97/124 (78%), Gaps = 7/124 (6%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| ||||| ||||||| ||||||||| ||||||||||||||||||| ||| ||
Sbjct 4618 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCACAAAGT-CTT 4674
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
||| | |||| |||| |||| || |||||| | | | |||||||||| ||||||
Sbjct 4675 ACCTCTGC-TTCACCCTGGCCAT-GGGTAGATCACTCCG-CTTCGGGTCTA-GACCCAGC 4730
Query 129 GACT 132
||||
Sbjct 4731 GACT 4734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241458743168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |