Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1550 625 7e-177 seq324 432 9e-119 seq323 77.0 8e-12 >seq1550 Length=4416 Score = 625 bits (692), Expect = 7e-177 Identities = 393/412 (95%), Gaps = 9/412 (2%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||| Sbjct 3337 CCACAAGTCAT-CCGCTAACTTTT-CAACGGTAGTCGGTTCGGTCCTCCAGTCAGT-GTT 3281 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| |||||| |||||||||||| |||||||||||||||||| |||||||||| |||||| Sbjct 3280 ACCTAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATT-CCCAGC 3225 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 3224 GACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGCCTCCCCTATTCGGTTAAGCTT-G 3167 Query 189 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG 248 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 3166 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACAGAACAAAGTCT 3107 Query 249 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3106 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 3047 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3046 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 2987 Query 369 GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 2986 GAGGATGGTCCCCCCATATTCAGACAAGGTTTCTCGTGCCCCGTCCTACTCG 2935 >seq324 Length=1027 Score = 432 bits (478), Expect = 9e-119 Identities = 353/415 (85%), Gaps = 14/415 (3%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| |||||| |||| |||| |||||||||||| |||||||| Sbjct 627 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTACC 684 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| | Sbjct 685 T-GTTACGGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 739 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||||||| ||||||||| | |||||| ||| | ||||| ||||||||||||||||| Sbjct 740 CCAGCGACTGGACGCCCTATTCGGACTCGATTT-CTCTACGGCTCCCCTATTCGGTTAAC 798 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 799 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTT--- 854 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 855 -GCGGGCTCCTACTTTTTGTAAGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 912 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||| Sbjct 913 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTAG 972 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| Sbjct 973 CCTTGGAGGATGGTCCCCCCATATTCAGACAGGGTTTCTCGTGCCCCGCCCTACT 1027 >seq323 Length=4734 Score = 77.0 bits (84), Expect = 8e-12 Identities = 97/124 (78%), Gaps = 7/124 (6%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||||||| ||||||||| ||||||||||||||||||| ||| || Sbjct 4618 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCACAAAGT-CTT 4674 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | |||| |||| |||| || |||||| | | | |||||||||| |||||| Sbjct 4675 ACCTCTGC-TTCACCCTGGCCAT-GGGTAGATCACTCCG-CTTCGGGTCTA-GACCCAGC 4730 Query 129 GACT 132 |||| Sbjct 4731 GACT 4734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241458743168