Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 210 4e-52
>seq1550
Length=4416
Score = 210 bits (232), Expect = 4e-52
Identities = 236/312 (76%), Gaps = 19/312 (6%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 915 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 856
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || ||||| |||
Sbjct 855 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTACGGAT 796
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| ||||||| || |||| | ||||||||| |||||| | | || ||||| |
Sbjct 795 CGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAATCCGACCTAGGCTCATCTAATA 736
Query 181 GCGATAAATCTTTGGTCAAAGAATGAT--GCCATCCTCTGACAT------TATGCGGTAT 232
||| | |||| ||| ||| ||| ||| | | ||||||||||
Sbjct 735 GCG-------TGAGGTC--CGAA-GATCCCCCACTTTCTCCCGTAGGACGTATGCGGTAT 686
Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292
||||| ||||||| ||||||| || | || |||||| || || | | ||||||||
Sbjct 685 TAGCGCCCGTTTCCGGACGTTATCCCCCACTACTAGGCAGATTCCT-AGGCATTACTCAC 627
Query 293 CCGTCCGCCACT 304
||||||||| ||
Sbjct 626 CCGTCCGCCGCT 615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998286412032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |