Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01001449.1
Length=395
Score E
Sequences producing significant alignments: (Bits) Value
seq11336 237 4e-60
seq8339 219 1e-54
>seq11336
Length=1455
Score = 237 bits (262), Expect = 4e-60
Identities = 299/409 (73%), Gaps = 15/409 (4%)
Strand=Plus/Plus
Query 2 GACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCC 61
|| || || ||| |||| |||| || |||||||||||||||||| || |||||||||
Sbjct 728 GATGGTACTGGCCCGGTCTGGACCGGTAACCTGTTCCCGTTCCTGTTTATTACCATTGCC 787
Query 62 TGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTC 121
||||||||||| ||||| ||||||||||||||| | || || |||||||| ||| ||||
Sbjct 788 TGTGGCGCGGTATCGGGCTTCCATGCGCTGATCGCTTCCGGTACCACGCCGAAGATGCTG 847
Query 122 GCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTG 181
|| | ||| | || ||| | | ||||| |||||||| ||||||||||| || || ||
Sbjct 848 GCGAATGAAGGGCAGGCCTGCTTTATCGGCTACGGCGGGATGCTGATGGAATCCTTTGTC 907
Query 182 GCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAAC 241
|||||||||||| ||||| | || | | || || || ||||||||||| || ||||||
Sbjct 908 GCCATCATGGCGCTGGTTTCTGCGTGTATCATCGATCCGGGCGTGTACTTTGCGATGAAC 967
Query 242 AGCCCG--------GCTGCCATTGTC-GGCAC---CGACGTGGTC---ACCGTGGCGCAA 286
|||||| |||| | | | || || ||||| ||| | | ||||||
Sbjct 968 AGCCCGATGGCGGTGCTGGCTCCGGCGGGGACGGTTGACGTAGTCGCTTCTGCGGCGCAG 1027
Query 287 ACCGTCAGCAGTTGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAAT 346
||||||||||||||||||||||||||||| || | ||| | ||| | |
Sbjct 1028 GTGGTCAGCAGTTGGGGCTTTGCCATTACGCCGGACACCCTGCATCAAATCGCCAATGAA 1087
Query 347 ATCGGTGAAACCACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395
|||||||| |||| | | || || ||||| |||||||| ||||
Sbjct 1088 GTCGGTGAACAATCCATTATCTCCCGCGCAGGCGGAGCGCCGACGCTGG 1136
>seq8339
Length=3561
Score = 219 bits (242), Expect = 1e-54
Identities = 199/251 (79%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 2 GACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCC 61
|| || || ||| || ||||||| |||| |||||||||||||||||||||||||| |||
Sbjct 2523 GATGGTACTGGCCCGCTGTGGAAAGGCGCTCTGTTCCCGTTCCTGTTCATCACCATCGCC 2464
Query 62 TGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTC 121
||||| ||||| || || ||||| |||||||| | || || |||||||| ||| ||||
Sbjct 2463 TGTGGTGCGGTATCTGGCTTCCACGCGCTGATTGCTTCCGGTACCACGCCGAAGCTGCTG 2404
Query 122 GCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTG 181
||| |||| | | |||| || | |||||||| || | ||||||||||| || ||||||
Sbjct 2403 GCCTGTGAAACCGATGCGCGCTTTATCGGTTATGGTGCGATGCTGATGGAATCCTTCGTG 2344
Query 182 GCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAAC 241
|| || |||||| ||||||| || || | || || || || |||||||||| ||||||
Sbjct 2343 GCGATTATGGCGCTGGTTGCTGCGTCTATCATCGAACCGGGTCTGTACTTCGCGATGAAC 2284
Query 242 AGCCCGGCTGC 252
| |||| ||||
Sbjct 2283 ACCCCGCCTGC 2273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1161467844768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |