Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq323 352 7e-95
seq1550 210 5e-52
seq324 194 4e-47
>seq323
Length=4734
Score = 352 bits (390), Expect = 7e-95
Identities = 340/443 (77%), Gaps = 45/443 (10%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
|||||||||||||||||||||||||||| |||||||||||| |||| || ||| || ||
Sbjct 3978 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTCACCCTGGGCGGATTAACCTGGCC 4037
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120
| ||||||||||| | ||||||||| | ||| ||| ||| |||||||||||||||
Sbjct 4038 CAGGAACCCTTGGTCATTCGGCGGACAAGTTTCTCACTTGTCTTTCGCTACTCATGCCTG 4097
Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGA--CACG 178
||||||||||| || ||||||||| |||| | || ||||| ||| || || |
Sbjct 4098 CATTCTCACTCCCACACCCTCCACCACTAGATCACTCTGCGGCTTC--CACGGATGCAGG 4155
Query 179 ACGCTCCCCTACCCAACCACACA---------------------GGTTGCC-----ACA- 211
||||||||||||||| |||||| ||| ||| |||
Sbjct 4156 ACGCTCCCCTACCCACCCACACCACTAGACAACCCCCCAAAAGGGGTCGCCGATGTACAT 4215
Query 212 --------------GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATC 257
|||||||||| |||| |||||||||||||| ||||||| | |||
Sbjct 4216 GTGTGAGTGCCGCGGCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCAGGATC 4275
Query 258 ACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCT 317
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 4276 ACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCT 4335
Query 318 GGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGA 377
|||||||| ||| || ||||||||||| ||||| ||| | ||||||||||||||| |
Sbjct 4336 GGTTGTCTTCGCGACCCCACATCCTTTTCCACTTAGTACACGCTTAGGGGCCTTAGCCGG 4395
Query 378 TGATCTGGGCTGTTTCCCTCTCG 400
||||||||||||||||||||||
Sbjct 4396 CGATCTGGGCTGTTTCCCTCTCG 4418
>seq1550
Length=4416
Score = 210 bits (232), Expect = 5e-52
Identities = 294/404 (73%), Gaps = 9/404 (2%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||| | || ||||||||||||| |||||||||| | | || ||| |
Sbjct 3939 CGACTACGCTTTTCAGCCTCGCCTTAGGGGTCGACTCACCCTGCCCCGATTAACGTTGGA 3880
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
| ||||||||||| ||||| |||| || |||||| | || |||||||| |
Sbjct 3879 CAGGAACCCTTGGTCTTCCGGCGTGCGGGTTTTTCACCCGCATTATCGTTACTCATGTCA 3820
Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177
|||||| |||| | || | ||||| || | || | || ||||| | || |||
Sbjct 3819 GCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCAACGGCTTACAG 3762
Query 178 GACGCTCCCCTACCCAACCACACAGGTTG---CCACAGCTTCGGCGGATAACTTAAGCCC 234
||||||||||||| | ||| | || || ||||||||| | || ||| ||||
Sbjct 3761 AACGCTCCCCTACCGCATCACTTACGTGATACCCGCAGCTTCGGTGCATGGTTTA-GCCC 3703
Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294
|| ||||| || |||| | ||| ||||||||||||||||||| ||||| |||| |
Sbjct 3702 CGTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAAGGGT 3643
Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354
||||||||| ||||||||||||||| |||||| || ||||||| ||||||||| |
Sbjct 3642 GGCTGCTTCTAAGCCAACCTCCTGGCTGTCTATGCCTTCCCACATCGTTTCCCACTTAAC 3583
Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|| |||| ||| ||||||||| | |||||| |||||||||||
Sbjct 3582 CATGACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 3539
>seq324
Length=1027
Score = 194 bits (214), Expect = 4e-47
Identities = 294/407 (72%), Gaps = 20/407 (5%)
Strand=Plus/Plus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| ||||||||||| || || ||| | | |
Sbjct 33 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 92
Query 64 GAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCA 122
|||||||||| ||||| |||| || |||||| | || |||| ||| | |||
Sbjct 93 GAACCCTTGGTCTTCCGGCGAGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCA 152
Query 123 TTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180
||| |||| | || | ||||| || || |||| | || ||||| | || ||| ||
Sbjct 153 TTCGCACTTCTGAT-ACCTCCAGCA-ACCCTCACAGGCCACCTTCAACGGCTTACAGAAC 210
Query 181 GCTCCCCTACC-CAACCACACAGGTTGCCA-----CAGCTTCGGCGGATAACT---TAAG 231
||||||||||| | || | | |||| | ||||||||| ||||| | ||
Sbjct 211 GCTCCCCTACCACTTGCA-ATAAATTGCAAATCCGCAGCTTCGG----TAACTGGCTTAG 265
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| ||||| || |||| | ||| ||||||||||||||||||| ||||| ||
Sbjct 266 CCCCGTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAAT 325
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
|||||||||||| |||||||| |||||| ||||| || ||||||| |||||||||
Sbjct 326 GATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTTTGCCTTCCCACATCGTTTCCCACTT 385
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|| || |||||| ||||||||| | |||||| |||||||||||
Sbjct 386 AGCCA-ATTTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177466024448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |