Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 327 3e-87
>seq1550
Length=4416
Score = 327 bits (362), Expect = 3e-87
Identities = 289/363 (80%), Gaps = 26/363 (7%)
Strand=Plus/Plus
Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222
||| ||||||||||||||| ||||| |||| ||||||||||||||| ||||| | |||
Sbjct 752 GTCGGATTAGCTAGTTGGTGGGGTAATGGCTCACCAAGGCGACGATCCGTAGCTGGTCTG 811
Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282
||||| ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 812 AGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG 871
Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342
|||||||||||||||||||||| |||||||||||||| | |||||||| | || |||||
Sbjct 872 TGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGG 931
Query 343 CCTTCGGGTCGTAAAGCTCTGT---CCTCAAGGAAG------------ATA--------- 378
||||||||| ||||||| || | |||||| |||
Sbjct 932 CCTTCGGGTTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTTACCTAATACGTGATTGT 991
Query 379 -ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
||||| |||| | || ||||| |||||||||| ||||||||||||||||||||||||
Sbjct 992 TTTGACGTTACTCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACG 1051
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497
|||| || ||||||| |||||||||| |||||||||| | || ||| ||||| ||||
Sbjct 1052 GAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCACGCAGGCGGTTTGTTAA 1110
Query 498 GTC 500
|||
Sbjct 1111 GTC 1113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497429618048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |