Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1550 327 3e-87 >seq1550 Length=4416 Score = 327 bits (362), Expect = 3e-87 Identities = 289/363 (80%), Gaps = 26/363 (7%) Strand=Plus/Plus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| ||||||||||||||| ||||| |||| ||||||||||||||| ||||| | ||| Sbjct 752 GTCGGATTAGCTAGTTGGTGGGGTAATGGCTCACCAAGGCGACGATCCGTAGCTGGTCTG 811 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||| | |||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 812 AGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG 871 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||||||||||||||||| |||||||||||||| | |||||||| | || ||||| Sbjct 872 TGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGG 931 Query 343 CCTTCGGGTCGTAAAGCTCTGT---CCTCAAGGAAG------------ATA--------- 378 ||||||||| ||||||| || | |||||| ||| Sbjct 932 CCTTCGGGTTGTAAAGCACTTTAAGTTGGGAGGAAGGGCAGTTACCTAATACGTGATTGT 991 Query 379 -ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 ||||| |||| | || ||||| |||||||||| |||||||||||||||||||||||| Sbjct 992 TTTGACGTTACTCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACG 1051 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497 |||| || ||||||| |||||||||| |||||||||| | || ||| ||||| |||| Sbjct 1052 GAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCACGCAGGCGGTTTGTTAA 1110 Query 498 GTC 500 ||| Sbjct 1111 GTC 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497429618048