Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1550 345 1e-92 >seq1550 Length=4416 Score = 345 bits (382), Expect = 1e-92 Identities = 323/408 (79%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 |||| | || ||||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 1000 TACTCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 1059 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| |||||||||||||||||||| | || ||| ||||| |||||||||| || Sbjct 1060 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGT 1119 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| | ||||||||| || ||||| |||||||||| |||||||| | || Sbjct 1120 GAAATCCCCGGGCTCAACCTGGGAACTGCATTTGAAACTGGCAAGCTAGAGTCTCGTAGA 1179 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || || ||||||| |||||||||||||||||||||| || ||||||| ||| |||| Sbjct 1180 GGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATAGGGAGGAATACCGGTGG 1239 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||||| |||||| |||||| || ||| |||||||||||||||||||||| Sbjct 1240 CGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAG 1299 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 ||||||||||||||||||||||||| |||||||||| ||| || | | || | | | Sbjct 1300 GATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTCAACT-GGAGGTTGTGCCCTTGA 1358 Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || | | ||| ||| ||||| ||||| || ||||||||||| Sbjct 1359 G-GCGTGGCTTCCGGAGCTAACGCGTTAAGTCGACCGCCTGGGGAGTA 1405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203063111936