Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq324 511 2e-142
seq1550 376 8e-102
seq323 241 4e-61
>seq324
Length=1027
Score = 511 bits (566), Expect = 2e-142
Identities = 412/487 (85%), Gaps = 17/487 (3%)
Strand=Plus/Minus
Query 1 TCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||
Sbjct 769 TCGAGTCCGAATAGGGCGTCCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 710
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|||||||||||||||||| |||||| | ||||||||||||||| |||| ||||| ||||
Sbjct 709 TGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGACTAGTGTTGCAAAA 650
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 649 CTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 590
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
Sbjct 589 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCTGCGGGGGTAGAGCACTGTTTAG 530
Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT-GCGCATCAGTTTTA 298
||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||
Sbjct 529 GCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAATACCGCA-GAG---TA 474
Query 299 CCGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| || ||||| || ||| ||||||||| ||||| | | ||||| || || || ||
Sbjct 473 CAGCTTGGGAGACAGAGCACCGGGTGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGA 414
Query 356 CTATCAGCTAAGGCCCCGAAA--TGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413
| ||||||||| ||| ||| || ||||||| | ||||| || || || ||
Sbjct 413 CCGCCAGCTAAGGTCCCTAAAATTG---GCTAAGTGGGA--AACGATGTGGGAAGGCAAA 359
Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473
|||||| ||||||||||||| |||||||||| ||||||||||| |||||| ||||||||
Sbjct 358 GACAGCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACT 300
Query 474 AGTCGAG 480
||||||
Sbjct 299 GGTCGAG 293
>seq1550
Length=4416
Score = 376 bits (416), Expect = 8e-102
Identities = 429/564 (76%), Gaps = 13/564 (2%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| || |||||| | |||||||||| ||||||||||||| | |||||| ||||
Sbjct 3201 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 3260
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| |||| ||||||| |||||||| ||||||| ||||||| |||| |||||||| |
Sbjct 3261 GGGCAGGTTGAAGGTTAGGTAACACTGACTGGAGGACCGAACCGACTACCGTTGAAAAGT 3320
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||| |||||| ||||| | |||||||||||| || ||||| ||| |||||||||||||
Sbjct 3321 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 3380
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239
|||||| |||||||||||| ||||| | | ||| | ||||||||||||||||||| |
Sbjct 3381 CCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTTCGGGGGTAGAGCACTGTTTCG 3440
Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299
||||||||||||| |||||||||||||| |||||||||||||| | | | | |||
Sbjct 3441 GCTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCGAAGAATGTTAT 3500
Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357
| |||||| | ||| ||||||||| |||||| ||||| || || || |||
Sbjct 3501 CACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACC 3558
Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417
||||||||| ||| || | | | ||||| | ||||| || || || |||||
Sbjct 3559 GCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGA--AACGATGTGGGAAGGCATAGACA 3616
Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477
|| |||| |||||||| |||||||||| | |||||||| |||||| |||||||| |||
Sbjct 3617 GCCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 3675
Query 478 GAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG-ATC 535
||| | | ||| ||| || | |||| ||| | |||||||| | ||| |||
Sbjct 3676 GAGTCGGCCTGCGCGGAAGATGTAACGGG-GCTAAACCATGCACCGAAGCTGCGGGTATC 3734
Query 536 ATTTATATGAT-CGGTAGGGGAGC 558
| || |||| ||||||||||||
Sbjct 3735 ACGTAAGTGATGCGGTAGGGGAGC 3758
>seq323
Length=4734
Score = 241 bits (266), Expect = 4e-61
Identities = 338/466 (73%), Gaps = 14/466 (3%)
Strand=Plus/Minus
Query 21 AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGT 80
||||||||||| |||||||||| | ||||||||||||||||||||| ||||| | |||
Sbjct 4734 AGTCGCTGGGTCTAGACCCGAAGCGGAGTGATCTACCCATGGCCAGGGTGAAGCAGAGGT 4675
Query 81 AACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTA 140
|| || |||||| ||||||| ||||||||||||||||||| |||||| ||||| |
Sbjct 4674 AAGACTTTGTGGAGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTG 4615
Query 141 GGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200
|||||||||||| || ||||| ||| ||||||||||||| |||||| ||||||||
Sbjct 4614 GGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAATGCATTTAGGTGC 4555
Query 201 TGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTTATGG-CTAGGGG---GTCATTG 254
|| ||| || | | | || |||||||| |||| |||| | | ||| || |
Sbjct 4554 AGCGTCACGTGTTTCTTACTGGAGGTAGAGCTACTG-GATGGCCGATGGGCCCTACAAGG 4496
Query 255 CGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGC 314
||| || | | |||||||||||||| | ||| | || || ||||||
Sbjct 4495 TTACTGACGTCAGC----CAAACTCCGAATGCCGGTAAGTGAGAGCGTGGCAGTGAGACT 4440
Query 315 ATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGA 374
||| | |||| | ||| ||||||| || | || || | ||||||||||| |
Sbjct 4439 GCGGGGGATAAGCTTCGTAGTCGAGAGGGAAACAGCCCAGATCGCCGGCTAAGGCCCCTA 4380
Query 375 AATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTG 434
| | |||||| || || || || | | || |||||| | |||| ||||||||
Sbjct 4379 AGCGTGTACTAAGTGGAA--AAGGATGTGGGGTCGCGAAGACAACCAGGAGGTTGGCTTA 4322
Query 435 GAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
|||||||||| | || ||||||||||||| |||||||| ||| ||
Sbjct 4321 GAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGGTCAAG 4277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689407774208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |