Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1550 250 5e-64 >seq1550 Length=4416 Score = 250 bits (276), Expect = 5e-64 Identities = 254/329 (77%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||||| Sbjct 2589 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGATA 2648 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| | Sbjct 2649 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATCTCTGAATGGGGGAACCCAAC 2708 Query 121 CCT-----TTGGGTCATTGCATGCTGAATACATAGGTATGCA--AAGCGAACGCGGCGAA 173 | | ||| || | ||||||||||||| |||| | |||||| || ||| Sbjct 2709 CATCATAAGATGGTTATCTTGTACTGAATACATAGG--TGCAAGAGGCGAACCAGGGGAA 2766 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 2767 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 2826 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290 ||||| |||| |||| ||| ||| | |||| ||| |||| ||||||||| Sbjct 2827 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 2880 Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 2881 GTGCGGCCATAGTGGGTGATAGCCCTGTA 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918295513632