Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 250 5e-64
>seq1550
Length=4416
Score = 250 bits (276), Expect = 5e-64
Identities = 254/329 (77%), Gaps = 18/329 (5%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | ||||||||||||||| | | |||||||||| ||||| ||||| |||||||
Sbjct 2589 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGATA 2648
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| |
Sbjct 2649 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATCTCTGAATGGGGGAACCCAAC 2708
Query 121 CCT-----TTGGGTCATTGCATGCTGAATACATAGGTATGCA--AAGCGAACGCGGCGAA 173
| | ||| || | ||||||||||||| |||| | |||||| || |||
Sbjct 2709 CATCATAAGATGGTTATCTTGTACTGAATACATAGG--TGCAAGAGGCGAACCAGGGGAA 2766
Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233
|||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 2767 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 2826
Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290
||||| |||| |||| ||| ||| | |||| ||| |||| |||||||||
Sbjct 2827 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 2880
Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319
| ||||||| |||||||||||| |||
Sbjct 2881 GTGCGGCCATAGTGGGTGATAGCCCTGTA 2909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918295513632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |