Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq139 497 3e-138 >seq139 Length=7828 Score = 497 bits (550), Expect = 3e-138 Identities = 430/526 (82%), Gaps = 18/526 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 6899 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTACG 6840 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||||||||| || | | || Sbjct 6839 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCTTCGGCGAGAGTC 6780 Query 127 GGCCCGCGAA-----GGAC---CTTAACGCCA-GAAAATGGTCGGTGAAGACCAGTTCCG 177 | || | || | ||||| | | ||| | | | | ||| | | ||| Sbjct 6779 ACACAGCCACCAGGTGGCCGTGCTTAATTCTACGAAGAGAGGCCG--AAGCCAA--TCCT 6724 Query 178 CT--TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAAC 234 || | | || |||||||| || |||| | || ||||||||||| | ||| ||||| Sbjct 6723 CTGATAACCGAATAAGTAAAGAATCGATGAAAGTGGTGGTATTTCATTGGCGACCGAA-- 6666 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 | ||||||| ||| |||||||||||| | ||||||| ||| ||||||||||||||| Sbjct 6665 GTCTCCCACCTATGCTACACCTCTCATGATTCTTCACAATGTCAAACTAGAGTCAAGCTC 6606 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 6605 AACAGGGTCTTCTTTCCCCGCTGTATTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 6546 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6545 AGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 6486 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6485 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 6426 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 | ||||| || | ||| |||||||||||||||||||||||||| Sbjct 6425 ACTCGAATTACTACGATTTAACATTCAGAGCACTGGGCAGAAATCA 6380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635013963296