Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1550 165 2e-38 >seq1550 Length=4416 Score = 165 bits (182), Expect = 2e-38 Identities = 209/285 (73%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCA-----TAAGGTACATACAAGCTCCCA 55 ||||||||||||||||||||||| ||||| ||| ||| || | |||| | | | Sbjct 1040 GGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGAGTAACGTCAAAACAATCACGTA 981 Query 56 C-ACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | || | || |||| | |||| ||||||| ||| || ||||| || Sbjct 980 TTAGGTAACTGCCCTTCCTCCCAACTTAAAGTGCTTTACAACCCGAAGG-CCTTCTTCAC 922 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | |||||| |||| || || |||||| ||||||||| |||||||||||| Sbjct 921 ACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTC 862 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| |||||||||||||||||||| ||||| | | |||||||||| | || Sbjct 861 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCT 802 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || |||| ||| ||||||| || |||| ||||| Sbjct 801 ACGGATCGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAAT 757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068678402624