Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq1550 165 2e-38
>seq1550
Length=4416
Score = 165 bits (182), Expect = 2e-38
Identities = 209/285 (73%), Gaps = 7/285 (2%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCA-----TAAGGTACATACAAGCTCCCA 55
||||||||||||||||||||||| ||||| ||| ||| || | |||| | | |
Sbjct 1040 GGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGAGTAACGTCAAAACAATCACGTA 981
Query 56 C-ACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114
| || | || |||| | |||| ||||||| ||| || ||||| ||
Sbjct 980 TTAGGTAACTGCCCTTCCTCCCAACTTAAAGTGCTTTACAACCCGAAGG-CCTTCTTCAC 922
Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174
||||| | |||||| |||| || || |||||| ||||||||| ||||||||||||
Sbjct 921 ACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTC 862
Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234
|||||||||| |||||||||||||||||||| ||||| | | |||||||||| | ||
Sbjct 861 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCT 802
Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| ||||| | || |||| ||| ||||||| || |||| |||||
Sbjct 801 ACGGATCGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAAT 757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068678402624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |