Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq139 210 7e-52 >seq139 Length=7828 Score = 210 bits (232), Expect = 7e-52 Identities = 317/441 (72%), Gaps = 26/441 (6%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| ||| | | | | ||| ||| || ||||||||||||||||| Sbjct 2041 TATTTTTAGTCACTATCTCACTGAA---GTAGTGGATAAGTTACGCGCCTGCTGCCTTCC 1985 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||| Sbjct 1984 TTGGATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTA 1925 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| |||||||||| | | || |||||||| |||||||||||||| | || Sbjct 1924 CCCGTAATAACCATGGTAGACTAATAGACTACCATC--TGGTTGATAGGGCAGACACTTC 1867 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282 | |||| | | | || |||| | | |||| || ||| ||| | Sbjct 1866 TTTCGGTTATCGGTAGATTA---CCTGCCGATAAACTGCGATATTCAGAGTCAACAAACA 1810 Query 283 GC-CCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTT- 340 | |||||| ||||||| | |||||| | |||| ||| | |||||| ||||| Sbjct 1809 ACGTCCGAAGACGATTGGTTTGT--ACTAATATCTGCACCTCTT-CAAAGTCGAGGTTTA 1753 Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC--AAA 398 | |||||||||||||| |||||| || | ||||||||| |||| |||| || Sbjct 1752 GTTGCATGTATTAGCTCCAGAATTTCCGCAGTTATCCAT----AAAGG--ATATCCGAAG 1699 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 || |||| ||| | ||||||||| ||||||||||||| | | | | | || Sbjct 1698 AGAATGATAGCTGCTCTAATGAGCCGTTCGCAGTTTCAC-----AAAAAGTTGAACTTTT 1644 Query 459 GACATGCATGGCTTAATCTTT 479 |||||||||||||||||||| Sbjct 1643 TACATGCATGGCTTAATCTTT 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510228161792