Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq139 210 7e-52
>seq139
Length=7828
Score = 210 bits (232), Expect = 7e-52
Identities = 317/441 (72%), Gaps = 26/441 (6%)
Strand=Plus/Minus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||| | ||||||| ||| | | | | ||| ||| || |||||||||||||||||
Sbjct 2041 TATTTTTAGTCACTATCTCACTGAA---GTAGTGGATAAGTTACGCGCCTGCTGCCTTCC 1985
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||
Sbjct 1984 TTGGATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTA 1925
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
||||| |||||||||| | | || |||||||| |||||||||||||| | ||
Sbjct 1924 CCCGTAATAACCATGGTAGACTAATAGACTACCATC--TGGTTGATAGGGCAGACACTTC 1867
Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282
| |||| | | | || |||| | | |||| || ||| ||| |
Sbjct 1866 TTTCGGTTATCGGTAGATTA---CCTGCCGATAAACTGCGATATTCAGAGTCAACAAACA 1810
Query 283 GC-CCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTT- 340
| |||||| ||||||| | |||||| | |||| ||| | |||||| |||||
Sbjct 1809 ACGTCCGAAGACGATTGGTTTGT--ACTAATATCTGCACCTCTT-CAAAGTCGAGGTTTA 1753
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC--AAA 398
| |||||||||||||| |||||| || | ||||||||| |||| |||| ||
Sbjct 1752 GTTGCATGTATTAGCTCCAGAATTTCCGCAGTTATCCAT----AAAGG--ATATCCGAAG 1699
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458
|| |||| ||| | ||||||||| ||||||||||||| | | | | | ||
Sbjct 1698 AGAATGATAGCTGCTCTAATGAGCCGTTCGCAGTTTCAC-----AAAAAGTTGAACTTTT 1644
Query 459 GACATGCATGGCTTAATCTTT 479
||||||||||||||||||||
Sbjct 1643 TACATGCATGGCTTAATCTTT 1623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510228161792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |