Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq9360 122 3e-23 >seq9360 Length=3388 Score = 122 bits (134), Expect = 3e-23 Identities = 264/381 (69%), Gaps = 22/381 (6%) Strand=Plus/Minus Query 23569 GGCCAGTTCGTTAACCAGCTCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTC 23628 |||||||| | |||||| |||||| || || ||| || || || |||| ||||| Sbjct 1039 GGCCAGTTGCTCTACCAGCCCCAGCAAATTCCGCTGACGGATATGTTTTTGCATTAGTTC 980 Query 23629 CAGCAGCGCCACCCGGCGATGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGAC 23688 |||||| |||| || | || | || ||| || ||||| |||| | || || || || Sbjct 979 CAGCAGGGCCATTCGTCTGTGAGCCATGATCTCATCATCGGGTACCACCGTTATGTCTAC 920 Query 23689 CAGCGGAAATGC-CTGATGATAAACC---GTGGCCGCCAATTCTGGCTCAGCAAAACAGT 23744 || ||||||||| ||| ||||| | | ||||||| | || || ||||| | Sbjct 919 CAACGGAAATGCGCTG-GAATAAAGCTGTCTTGCCGCCA---CGGGGTCGGCAAAGGCAT 864 Query 23745 CCAGACAGCGCGTGCTGTACGGATA-CGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGA 23803 |||| |||| | ||||||||| ||| || | ||| || ||||| |||| ||| Sbjct 863 CCAGCCAGCACAATGAGTACGGATAGGGGCTTCG-GCAGCCATGATAAAAGAGCATCGGT 805 Query 23804 ATGACCACCGGTAGCTGATCGT--TGCCCTG-TTCTAGATGCCGCTGCATCGCGGCGACC 23860 || ||| || || | || | ||||||| || ||||| ||||||||||| || | | Sbjct 804 AT---CACAAGTGGCAGTTCCTTATGCCCTGCGTCCAGATGGCGCTGCATCGCCGCCATC 748 Query 23861 GCATACCGTAGCAATCGAAACGCCATCAGCTTTTCCGGGCGG--CTCTGGTGCTCTATCA 23918 ||||| || | || ||||| ||||| || || ||| | || || |||||||||| Sbjct 747 GCATAACGCAACAGACGAAAAGCCATATGCGGCTC--GGCTGAACTTTGATGCTCTATCA 690 Query 23919 -GACAGTAGACGTAACCATCA 23938 ||| ||||| ||||| ||| Sbjct 689 CCACA-TAGACATAACCGTCA 670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166774265439576