Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq7475 297 5e-76
>seq7475
Length=18404
Score = 297 bits (328), Expect = 5e-76
Identities = 541/790 (68%), Gaps = 4/790 (1%)
Strand=Plus/Minus
Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711
|||||||| |||||||| || ||||| | | | || | ||| | ||| | |||
Sbjct 17486 ATGAAACAGTATTTAGAACTGATGCAAAAAGTGCTGGATGAAGGCACACAGAAAAACGAC 17427
Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771
|| || || ||| ||||| || | || || | ||| | || || || | || ||
Sbjct 17426 CGTACCGGAACCGGAACGCTTTCCATTTTTGGTCATCAGATGCGTTTTAATCTGCAGGAA 17367
Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831
|| || ||||| || || || ||| | ||| | ||||| |||||| |||| |||||
Sbjct 17366 GGGTTCCCGCTGGTTACGACTAAACGCTGCCATTTACGCTCGATCATTCATGAGCTGCTG 17307
Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891
|||||||| | ||||| || ||||| ||| |||| || || ||| | || |||
Sbjct 17306 TGGTTTTTGCAGGGCGACACCAACGTTGCCTACCTGCATGAAAACAACGTCTCAATCTGG 17247
Query 37892 GATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCG 37951
|| || |||||||| |||||||| || | |||||| |||| ||| ||||||||| ||
Sbjct 17246 GACGAATGGGCGGATGAAAACGGTAATTTAGGCCCGGTTTATGGCAAACAATGGCGCGCG 17187
Query 37952 TGGAAGGGAGCAGACGGGAAAACCATC--GACCAGATCGCATGGGTTGTCGAAGAGATCA 38009
||| |||| || | |||| ||||||||| | ||| | | || |||
Sbjct 17186 TGGCCTACGCCAGATGG--ACGCCATATTGACCAGATCACCACGGTGTTAAACCAGCTCA 17129
Query 38010 AACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACG 38069
|| | ||| | || ||||| | | || ||| ||||| || | || ||||
Sbjct 17128 AAAATGACCCGGACTCTCGCCGTATCATCGTTTCCGCATGGAACGTCGGCGAGCTGGATA 17069
Query 38070 AGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGT 38129
| ||| |||| ||||||| ||| ||| ||||| || || || | ||| | | |
Sbjct 17068 AAATGGCGCTGGCGCCGTGCCATGCGTTCTTCCAGTTTTACGTAGCGGATGGCAAGCTCT 17009
Query 38130 CATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGA 38189
| ||| | | ||||| || ||| ||| | || |||||||||||||| || |
Sbjct 17008 CCTGCCAACTGTATCAGCGTTCGTGCGATGTGTTCCTCGGCTTGCCGTTTAACATTGCCA 16949
Query 38190 GCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTCA 38249
||||| | |||||| ||| ||| | || || || ||||| |||| || ||||| |
Sbjct 16948 GCTACTCCCTGTTGGTGCACATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTGATTTTG 16889
Query 38250 TTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGC 38309
| | ||||| |||||| || |||||| |||||| |||| ||| || | |||||||
Sbjct 16888 TCTGGACCGGTGGCGACACGCACCTGTACAGCAATCATATGGATCAAACGCATCTGCAGC 16829
Query 38310 TGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTATCT 38369
| | || || |||||| ||||||||||||| || | ||||| ||||| ||||| |
Sbjct 16828 TTAGCCGTGAACCGCGCGCGCTGCCGAAGCTGGTTATCAAACGTAAGCCTGAATCTATTT 16769
Query 38370 TTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATTAAAG 38429
|||||||| | ||| ||||| ||||| | ||||||||||||||||| | |||||||
Sbjct 16768 TTGACTATCGCTTCGAAGACTTCGAAATTGAAGGCTACGATCCGCATCCTGGTATTAAAG 16709
Query 38430 CACCGGTGGC 38439
| || |||||
Sbjct 16708 CGCCAGTGGC 16699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130622350291050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |