Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 136 1e-29 >seq4 Length=233 Score = 136 bits (150), Expect = 1e-29 Identities = 142/178 (80%), Gaps = 9/178 (5%) Strand=Plus/Plus Query 43 TATTTATT-GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 ||||| || ||||||| ||| | | | | |||| ||| || |||||||||||||||| Sbjct 4 TATTTTTTAGTCACTATCTCACTGAATAG---TTGGATAAGTTACGCGCCTGCTGCCTTC 60 Query 102 CTTGGA-TGTGGTAGCCGTTTCTCAGGCTCCCTCT-CCGGAATCG-AACCCTAATTCCCC 158 |||||| |||||||||||||||| ||||||||||| ||||| ||| |||||| |||| || Sbjct 61 CTTGGAATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCCGGAGTCGAAACCCTTATTCTCC 120 Query 159 GTTACCCGTTGATACCATGGTAGGCCACTA-TCCTACCATCGAAAGTTGATAGGGCAG 215 ||||||||| |||||||||| | || |||||||| ||||||||||||| Sbjct 121 GTTACCCGTAATAACCATGGTAGATTAATAGAACTACCATC-TTGGTTGATAGGGCAG 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509285536256