Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq98 147 9e-33 >seq98 Length=2199593 Score = 147 bits (162), Expect = 9e-33 Identities = 209/298 (70%), Gaps = 22/298 (7%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||| |||||| |||| | | |||||| |||||| ||||| Sbjct 2004201 CCCGTCTTGAAACACGGACCGAGGAGTGTAACTTGTGCGCGAGTCAGAGGGTGTTAAACC 2004260 Query 468 CGTGCGCGTAATGAAAGTGAACG--------------GAGGTGGGAACC--------CGT 505 ||| ||||||||| || | ||| ||||| || || Sbjct 2004261 TTACGGCGAAATGAAAGTAAAGGTCGATTAATCGGCTGAGATGGGATCCTTGCTTTACGG 2004320 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || ||||||||| || || || ||| | | ||| ||||| || | Sbjct 2004321 CTTGGCGCACCATCGCCCTGTCTCGAAAGCTTGCTTTTGGGCAGAGGTAGAGCGTACAGG 2004380 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||| Sbjct 2004381 TTGCGACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGAGGAAACTCTGGT 2004440 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | ||| | |||||||| ||||||||||||||| | | ||| |||||||||||| Sbjct 2004441 GGAAGTTCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGTATAGGGGCGA 2004498 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||| |||||||||||||||||||||||| ||| || ||||||||| Sbjct 1997524 AGAGCGTACAGGTTGCGACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGA 1997583 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | ||| | |||||||| ||||||||||||||| | | ||| || Sbjct 1997584 GGAAACTCTGGTGGAAGTTCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGT 1997643 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1997644 ATAGGGGCGA 1997653 Score = 98.7 bits (108), Expect = 4e-18 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| ||| || | |||| ||| || |||||||||| Sbjct 2003831 GAGTCGGGTTGCTTGAAAGTGCAGCCTTAAGCCGGTGATAAACTTCATCGAAAGCTAAAT 2003890 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| || ||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 2003891 ATTGTAAGGAATGCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 2003950 Query 160 AGAGAGTTAAAAAGCACGTGAAAT 183 |||||||| || || ||||||||| Sbjct 2003951 AGAGAGTTCAAGAGAACGTGAAAT 2003974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995903050