Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22]
191 sequences; 59,468,623 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq98 147 9e-33
>seq98
Length=2199593
Score = 147 bits (162), Expect = 9e-33
Identities = 209/298 (70%), Gaps = 22/298 (7%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||| |||||| |||| | | |||||| |||||| |||||
Sbjct 2004201 CCCGTCTTGAAACACGGACCGAGGAGTGTAACTTGTGCGCGAGTCAGAGGGTGTTAAACC 2004260
Query 468 CGTGCGCGTAATGAAAGTGAACG--------------GAGGTGGGAACC--------CGT 505
||| ||||||||| || | ||| ||||| || ||
Sbjct 2004261 TTACGGCGAAATGAAAGTAAAGGTCGATTAATCGGCTGAGATGGGATCCTTGCTTTACGG 2004320
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| ||||||||| || || || ||| | | ||| ||||| || |
Sbjct 2004321 CTTGGCGCACCATCGCCCTGTCTCGAAAGCTTGCTTTTGGGCAGAGGTAGAGCGTACAGG 2004380
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||
Sbjct 2004381 TTGCGACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGAGGAAACTCTGGT 2004440
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| | ||| | |||||||| ||||||||||||||| | | ||| ||||||||||||
Sbjct 2004441 GGAAGTTCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGTATAGGGGCGA 2004498
Score = 140 bits (154), Expect = 1e-30
Identities = 109/130 (84%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| || |||| |||||||||||||||||||||||| ||| || |||||||||
Sbjct 1997524 AGAGCGTACAGGTTGCGACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGA 1997583
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
||||||||||||||| | ||| | |||||||| ||||||||||||||| | | ||| ||
Sbjct 1997584 GGAAACTCTGGTGGAAGTTCGTATCGGTTCTGACGTGCAAATCGATCGATAGACTTGAGT 1997643
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 1997644 ATAGGGGCGA 1997653
Score = 98.7 bits (108), Expect = 4e-18
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| | |||||| ||| || | |||| ||| || ||||||||||
Sbjct 2003831 GAGTCGGGTTGCTTGAAAGTGCAGCCTTAAGCCGGTGATAAACTTCATCGAAAGCTAAAT 2003890
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| || ||||||| ||||||| |||| ||||| || |||| |||||| |
Sbjct 2003891 ATTGTAAGGAATGCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 2003950
Query 160 AGAGAGTTAAAAAGCACGTGAAAT 183
|||||||| || || |||||||||
Sbjct 2003951 AGAGAGTTCAAGAGAACGTGAAAT 2003974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995903050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |