Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq98 489 5e-136 >seq98 Length=2199593 Score = 489 bits (542), Expect = 5e-136 Identities = 426/523 (81%), Gaps = 12/523 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 1999488 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTACG 1999429 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||||||||| || | | || Sbjct 1999428 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCTTCGGCGAGAGTC 1999369 Query 127 GGCCCGCGA--AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT----TCCGCTT 180 | || | ||| || | ||| || | | |||| | | ||| ||| Sbjct 1999368 ACACGGCCACCAGGTGGCTATGTTTA-AAACTGCTAAGAGAAGCCGAAGCTAATCCTCTT 1999310 Query 181 C--ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGC 237 | || |||||||| || |||| | || ||||||||||| | ||| ||||| | | Sbjct 1999309 ATAACCGAATAAGTAAAGAATCGATGAAAGTGGTGGTATTTCATTGGCGACCGAAGC--C 1999252 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||| ||| |||||||||||| | ||||||| ||| |||||||||||||||||| Sbjct 1999251 TCCCACCTATGCTACACCTCTCATGATTCTTCACAATGTCAAACTAGAGTCAAGCTCAAC 1999192 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| Sbjct 1999191 AGGGTCTTCTTTCCCCGCTGTATTTGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGA 1999132 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1999131 TAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 1999072 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1999071 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACT 1999012 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||| || | ||| |||||||||||||||||||||||||| Sbjct 1999011 CGAATTACTACGATTTAACATTCAGAGCACTGGGCAGAAATCA 1998969 Score = 489 bits (542), Expect = 5e-136 Identities = 426/523 (81%), Gaps = 12/523 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 2006333 CTTTTGCTCTACGTGAGGTTTCCGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTACG 2006274 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||||||||| || | | || Sbjct 2006273 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCTTCGGCGAGAGTC 2006214 Query 127 GGCCCGCGA--AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT----TCCGCTT 180 | || | ||| || | ||| || | | |||| | | ||| ||| Sbjct 2006213 ACACGGCCACCAGGTGGCTATGTTTA-AAACTGCTAAGAGAAGCCGAAGCTAATCCTCTT 2006155 Query 181 C--ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGC 237 | || |||||||| || |||| | || ||||||||||| | ||| ||||| | | Sbjct 2006154 ATAACCGAATAAGTAAAGAATCGATGAAAGTGGTGGTATTTCATTGGCGACCGAAGC--C 2006097 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||| ||| |||||||||||| | ||||||| ||| |||||||||||||||||| Sbjct 2006096 TCCCACCTATGCTACACCTCTCATGATTCTTCACAATGTCAAACTAGAGTCAAGCTCAAC 2006037 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| Sbjct 2006036 AGGGTCTTCTTTCCCCGCTGTATTTGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCTAGA 2005977 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2005976 TAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 2005917 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2005916 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACT 2005857 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||| || | ||| |||||||||||||||||||||||||| Sbjct 2005856 CGAATTACTACGATTTAACATTCAGAGCACTGGGCAGAAATCA 2005814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196876768