Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3 105 1e-20 >seq3 Length=3112 Score = 105 bits (116), Expect = 1e-20 Identities = 163/220 (74%), Gaps = 12/220 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||| ||| || ||||| |||||||| | |||||| | || ||| Sbjct 1600 GTACAAAGGACAGGGACGTAATCAGCGTGAGCT-GATGACTCACACTTACTTG-AAGTTC 1543 Query 61 CTCGTTGA-AGACCAACAATTGCAATGATCT-ATCCCCATCACGATGAAATTTCAAA-GA 117 || ||| | ||| || ||||||||| ||| || || | ||| ||||| | | Sbjct 1542 CTTGTTCACAGAG-AATAATTGCAATC-TCTGATACCAAAGACGGGATAATTTGACTCGT 1485 Query 118 TTACCCG--GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||| || || ||| || || | || | || || | ||| ||||||||||| Sbjct 1484 TTACCATACGATCTCTCG--CATGGGCACAG-CGCGCTGCAATTTTCATTGTAGCGCGCG 1428 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 215 |||||||| |||||| |||||||||||||||||||||| Sbjct 1427 TGCGGCCCCAGACATCTTAGGGCATCACAGACCTGTTATT 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993152100