Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4 468 2e-129 seq280 309 1e-81 >seq4 Length=2093 Score = 468 bits (518), Expect = 2e-129 Identities = 426/527 (81%), Gaps = 14/527 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| || ||||||| || ||||| | |||||||||||||||||| | Sbjct 503 CTTTTAGTCTACGACAGGTTTCTGTCCTGTCTGAGTACGGCTTAGGACACCTGCGTTACG 562 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||||||| || || || Sbjct 563 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACTATGTCATCGACGTGGGTC 622 Query 127 GGCCCG-CGAAGG----AC--CTTAACGCCA-GAAAATGGTCGGTGAAG-ACCAGTTCCG 177 | | || || | | || ||||| ||| || || | | |||| | || | || Sbjct 623 GTCGCGGCGCAAGCGCCACGACTTAATTCCAAGAGAAAGCTACA-GAAGCAGCAATCCCC 681 Query 178 CT-TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACG 235 | | | || ||||||| || ||||| || ||||||||||||| || ||||| | Sbjct 682 ATATAACCGAATAAGTAAGGAATCGATAGAAGTGGTGGTATTTCACTGACGACCGAA--G 739 Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||| ||| |||||||| | | | ||||||||||| ||||||||||||||||| Sbjct 740 TCTCCCACCTATACTACACCTTCTATGACTCTTCACAAAGTCAGACTAGAGTCAAGCTCA 799 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 | ||||||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct 800 ATCGGGTCTTCTTTCCCCGCATAACTTGCCAAGCCCGTTCCCTTGGCTGTGATTTCGCTA 859 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 860 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCGTGCACGTCACTAATTAGAT 919 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 920 GACGAGGCATTTGGCTACCTTAAGAGTGTCATAGTTACTCCCGCCGTTTACCCGCGCTTA 979 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 | | |||| | | || |||||||||||||||||||||||||||| Sbjct 980 ATCAAGTTTCCTTAGCTTAACATTCAGAGCACTGGGCAGAAATCACA 1026 >seq280 Length=104067 Score = 309 bits (342), Expect = 1e-81 Identities = 322/412 (78%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| || ||||||| || ||||| | |||||||||||||||||| | Sbjct 74184 CTTTTAGTCTACGACAGGTTTCTGTCCTGTCTGAGTACGGCTTAGGACACCTGCGTTACG 74125 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||||||| || || || Sbjct 74124 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACTATGTCATCGACGTGGGTC 74065 Query 127 GGCCCG-CGAAGG----AC--CTTAACGCCA-GAAAATGGTCGGTGAAG-ACCAGTTCCG 177 | | || || | | || ||||| ||| || || | | |||| | || | || Sbjct 74064 GTCGCGGCGCAAGCGCCACGACTTAATTCCAAGAGAAAGCTACA-GAAGCAGCAATCCCC 74006 Query 178 CT-TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACG 235 | | | || ||||||| || ||||| || ||||||||||||| || ||||| | Sbjct 74005 ATATAACCGAATAAGTAAGGAATCGATAGAAGTGGTGGTATTTCACTGACGACCGAA--G 73948 Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||| ||| |||||||| | | | ||||||||||| ||||||||||||||||| Sbjct 73947 TCTCCCACCTATACTACACCTTCTATGACTCTTCACAAAGTCAGACTAGAGTCAAGCTCA 73888 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 | ||||||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct 73887 ATCGGGTCTTCTTTCCCCGCATAACTTGCCAAGCCCGTTCCCTTGGCTGTGATTTCGCTA 73828 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 73827 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCGTGCACGTCACT 73776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635184629120