Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq280 77.0 5e-12 seq4 77.0 5e-12 >seq280 Length=104067 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | |||| | ||||| | | | |||| || |||| | Sbjct 74512 GTACGAGAGGAACCGCT-AGTCCAGAC-ATTTGGTATATACAGCTGCTCGATAGGGCAAT 74569 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || | || ||||||||||| ||| |||| ||||| ||||||||||||||| || Sbjct 74570 GCTGTGAGGCTACCATCTGACGGAATATGACTGAAAGCCTCTAAGTCAGAAGCC 74623 >seq4 Length=2093 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | |||| | ||||| | | | |||| || |||| | Sbjct 175 GTACGAGAGGAACCGCT-AGTCCAGAC-ATTTGGTATATACAGCTGCTCGATAGGGCAAT 118 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || | || ||||||||||| ||| |||| ||||| ||||||||||||||| || Sbjct 117 GCTGTGAGGCTACCATCTGACGGAATATGACTGAAAGCCTCTAAGTCAGAAGCC 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192540160