Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 223 1e-55 >seq3 Length=3112 Score = 223 bits (246), Expect = 1e-55 Identities = 319/437 (73%), Gaps = 22/437 (5%) Strand=Plus/Minus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 |||||||||||| ||| || |||||||||| |||||||||||||||||||| |||| Sbjct 428 GTCACTACCTCCTCGTACTAAGAGTGGGTAATTTTCGCGCCTGCTGCCTTCCTTGTATGT 369 Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 |||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct 368 AAAAGCCGTTTCTCAGGCTATTTCTCCGGAGTCGAACCCTAATTCTCCGTTACCCGTCAC 309 Query 171 TACCATGGTAGGCCACTATCCTACCATCGAAAGT-TGATAGGGCAGAAATTTGAATGAAC 229 |||| | ||| || || || || | | |||| |||||||||||| | ||| Sbjct 308 AACCACGTCAGGACAATACACTGCCGTTGGAAGTGTGATAGGGCAGACACAGCTTTGACA 249 Query 230 CATCGCCGGCTC-AAGGCCATGCGAT--TCGTTA-AGTTATTATGAATCACCAAGGAGCC 285 ||| |||||| | |||||||||| || ||| | | ||||| || ||| ||| | | Sbjct 248 CATTGCCGGCACAAAGGCCATGCAATCAGCGTAATAATTATTCCGAGTCAACAA-AATCA 190 Query 286 CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA--AGT---CGGGGTTT 340 | | ||||||||| | |||||||| | || | | || | ||| | | ||| Sbjct 189 ACAA-----GTTGGTTTTGT-TCTAATAAGTGCA-CGGTGCCAACGAGTGACCCCGCTTT 137 Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACTATCAA 397 | |||||||||||||| ||||||||| | ||||||||| ||| || || | ||||| Sbjct 136 TATGCATGTATTAGCTCCAGAATTACCGCAGTTATCCATATAGGAAAGTGTCATGATCAA 77 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 || ||| ||| | ||||||||||| ||| ||||| | || | | | ||||| Sbjct 76 TAGAATCATAGCTGTTGTAATGAGCCATACGCGGTTTCGTAGGCAAG-CTACATGTACTT 18 Query 458 AGACATGCATGGCTTAA 474 ||||||||||||||||| Sbjct 17 AGACATGCATGGCTTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510385802240