Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parascaris_20equorum_20[genbank_20GCA_5F000951375.1_202014-09-26] 60,399 sequences; 185,376,996 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq59144 192 2e-46 >seq59144 Length=567 Score = 192 bits (212), Expect = 2e-46 Identities = 224/309 (72%), Gaps = 30/309 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | |||||| ||||||| || Sbjct 249 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCGAGTCATTGGGTGGTAA 308 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACCCGTGAG 508 ||| | ||||||||||||| || | || ||||| || | ||| Sbjct 309 ACCTAAGGGCGTAATGAAAGTAAAAGTCACCTCGATGTGGCCGATATGGGATCCGGAGAG 368 Query 509 --------------GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554 || ||||||| | || |||| || ||| || | ||| | Sbjct 369 CTTATGAGCAATTCGGCGCACCATAGCCCCGTCCTCATTGCTTGCAATAGGGCGGAGGTA 428 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| | || ||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 429 GAGCGCATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAG 488 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||| | || |||||||||| ||||||||||||||||| | ||||||| Sbjct 489 GAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTA 548 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 549 TAGGGGCGA 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078704441450